Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq67 156 3e-33
seq23 149 5e-31
seq1 98.7 7e-16
>seq67
Length=2709248
Score = 156 bits (172), Expect = 3e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | | ||||| ||| || ||||||||||| ||||||||||||||
Sbjct 458673 CATGCCACCGCGCAGACGAAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATC 458732
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| |||| ||||||||||| || |||||||||||||| |||||||| |
Sbjct 458733 CGACAGAGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGCTGATCCGG 458792
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | ||| ||||| || |||||| ||||| | | || ||||| | || ||
Sbjct 458793 GGGGATACCCTCCTTGTCTTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGACTC 458852
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||| ||| || ||||| || ||||| ||||| |||||||| |||||
Sbjct 458853 GACTTCCAGCGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 458903
Score = 150 bits (166), Expect = 1e-31
Identities = 161/211 (76%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||||||||||| ||||||||||| |||| || || |||| ||
Sbjct 458923 ACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTCCGACCGTCCTCG 458982
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||||||||| ||||||| |||||||| || | ||| | ||| ||||| |||
Sbjct 458983 AGCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGA 459042
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| ||| || ||| | |||||||| | || |||||||||| || || ||||
Sbjct 459043 ATCTTCGACTTGACATTGT--CGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCT 459100
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||| ||||| || ||||| || |||||
Sbjct 459101 TGCCCGTCAGGGTTTTGACGAAAATCTGCAT 459131
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG- 44168
||| || | ||| | || ||| ||||| || || |||||| || |||||||| || |
Sbjct 458448 TCCGCCACGCAGACGCAGCACTAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGA 458507
Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
| || | || | || ||||||||||| || || ||||||| |||||||| || | ||
Sbjct 458508 CAAGGTACGGC-CATCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAG 458566
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288
| | || ||||| ||| ||||| ||| | | | || || |||| ||||| |
Sbjct 458567 GGATGCCCTCCTTATCCTGGATCTTGCTCTTTACGTTATCAATCGTATCGGATGATTCGA 458626
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| || | ||| || || ||||| || | ||||||||||||||| ||||||
Sbjct 458627 CTTCGAGCGTGATGGTTTTTCCAGTCAAGGTCTTCACGAAGATCTGCATG 458676
Score = 86.0 bits (94), Expect = 5e-12
Identities = 130/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| ||||| ||| |||||||||||||| || | ||| || |||| ||
Sbjct 459151 ACGAGGTGCAGCGTCGACTCTTTTTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCG 459210
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || || ||||| | |||||||| || | ||| | || ||||| |||
Sbjct 459211 AGTTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGG 459270
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | ||||| |||| || |||||||| | || || |||||
Sbjct 459271 ATCTTGGACTTGACGTTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATGGTCTTG 459330
Query 44309 CCCGT 44313
|||||
Sbjct 459331 CCCGT 459335
>seq23
Length=7462253
Score = 149 bits (164), Expect = 5e-31
Identities = 174/232 (75%), Gaps = 5/232 (2%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || ||| ||||| |||||||||||||| ||||||||||| ||||
Sbjct 7209997 CCACCACGCAGACGCAGCACTAGGTGTAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 7209938
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || |||||||| || || |||||||||| |||||||| || | ||
Sbjct 7209937 AGCGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAGATCAGGCGCTGCTGGTCAG-GGGG 7209879
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCA 44288
| || ||||| ||| ||||| ||| || ||| | || |||||| || ||||
Sbjct 7209878 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT--CGATCGTGTCGCTCGACTCCA 7209821
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
|||| | || || ||||| ||||||||||||||||| ||||| ||||||||
Sbjct 7209820 CCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGAT 7209769
>seq1
Length=15654088
Score = 98.7 bits (108), Expect = 7e-16
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| |||| || || | || || |||||||| || || || |
Sbjct 11956322 CCTTCTGGATGTTGTAGTCGGACAGAGTCCGGCCATCCTCAAGCTGCTTGCCAGCGAAAA 11956381
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267
| | ||||||||| || | ||| | || ||||| ||| ||||| ||||| |
Sbjct 11956382 TGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGT 11956441
Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327
| || ||||| | ||| || ||||||| || || ||||| || || |||||||||||||
Sbjct 11956442 CGATCGTGTCCGAGGACTCGACCTCCAGAGTGATGGTCTTGCCAGTAAGGGTCTTCACGA 11956501
Query 44328 AG 44329
||
Sbjct 11956502 AG 11956503
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990049009360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |