Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1461 156 9e-33 seq23 84.2 5e-11 >seq1461 Length=46181 Score = 156 bits (172), Expect = 9e-33 Identities = 326/474 (69%), Gaps = 14/474 (3%) Strand=Plus/Plus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCG-GGAGTTT 230231 |||||| ||||||| || |||| | || || ||||| || | ||| | |||| | Sbjct 33081 TTTGCCCAGCGTCTGGTTGCCTTTGCCGCCGTCGAGGGTAT-CT-TCTTCAGCGGAGCCT 33138 Query 230232 CTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACG 230290 ||| ||||||| ||||| ||| ||| ||||||| || || | || |||| Sbjct 33139 TTGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTGACCTTCTCCAACG 33198 Query 230291 AGTTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAG 230349 || ||||| || |||||||||||||| || | | |||| | || || | || | Sbjct 33199 AGCTCATCTCGCGTGACGAGGGTCTCCA-CACCGACTTCGCCTGCCTGCTGCACTCTCAC 33257 Query 230350 CTCCAGAACAA-GCTACCATTCGAGACGGTCAA--ACAA-ATCATTACAGAAGCAGTTGA 230405 ||| ||||| |||| || || ||||| || | ||||| || || || || Sbjct 33258 CTCAAGAACCGCGCTAGCA----AGCAGGTCATCTACGACATCATCACCGATGCCGTCTC 33313 Query 230406 AAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGA 230465 | || ||||||||| | |||||| | || || ||| | ||||||||||| Sbjct 33314 CATTGAGAAGGAGTTCCTCACCGACGCTCTGCCCTGCGCCCTGCTCGGCATGAACGCCAC 33373 Query 230466 ACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525 || ||| |||||||| || || || |||||||| | | ||||| || || |||| Sbjct 33374 CCTCATGCAGCAGTACATTGAGTTTGTCGCCGACCGTCTCCTGGTTGCCCTCGGCAACGA 33433 Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585 || || |||||||| | |||||||| | || |||||| ||| || || || || Sbjct 33434 CAAGGTCTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGAAA 33493 Query 230586 GACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAA 230639 ||||||||||||||| |||||||| ||||||| |||| | ||||||| ||||| Sbjct 33494 GACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCTGGTGTCATGAA 33547 >seq23 Length=618107 Score = 84.2 bits (92), Expect = 5e-11 Identities = 145/209 (69%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 281817 CAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGC 281876 ||||| | ||| ||| ||||| | | ||| ||||| | ||||||| |||||| Sbjct 289739 CAGTTGACGTTGTTGGAGCCGACAAAGTTCTGTGCCAGACCAATGATTGTCTGCTGAAGA 289680 Query 281877 GATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCACTGAACTGTGCTACC 281936 || |||||||||||| ||||| ||||||||| | |||||| |||| | ||| Sbjct 289679 GACTGCTCACCGTGGTGGTAGGCTGTGTGTTCGGAGATGTAACCAGCCAACTCGACCACC 289620 Query 281937 TTCACGTC--TGATGTCAAGTTGCGTTTGAAAGCGCAATATAATACTTTTCGTTGAGAAG 281994 ||| ||| ||| ||| |||||| ||||| | || | || || || || || Sbjct 289619 TTCTTGTCCTTGA--TCAGGTTGCGCTTGAAGCAGGCGTAAATGACCTTGCGCTGTCCAG 289562 Query 281995 GCTTGAAACCATCAACGACAGACGGAATG 282023 |||||| ||| |||| ||||| |||||| Sbjct 289561 GCTTGAGACCGTCAATAACAGAAGGAATG 289533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057799346419970