Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq857 136 5e-27 seq1461 118 1e-21 >seq857 Length=1029652 Score = 136 bits (150), Expect = 5e-27 Identities = 472/730 (65%), Gaps = 16/730 (2%) Strand=Plus/Plus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 ||||||||||| || || | | | | || || || || | || ||||| | | | Sbjct 769204 TCAAACTCGTCACCGTGGACGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGGGTC 769263 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 || || |||| | || || || ||||| ||||| || |||||||| || || | || Sbjct 769264 CAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAAC 769323 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 || || | | | ||||| ||||| ||||| || || |||||| | | Sbjct 769324 AGGTCGCGAGCACGGACCTCCTCCTTTCCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAG 769383 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190 | || | ||||| || || | ||| ||| | | | || || || ||||| || ||| Sbjct 769384 ACGTCGGCGTGCCAAGGCTCAAGGTAGATGCAGAAAGCACCGGGGCGCTTGTTGCCACCC 769443 Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250 || || | ||| | || ||||| || || || | | ||| || || || || ||||| Sbjct 769444 TGGTCGACGTAGCGGGCAGTGTTGTTGTAGACACGGAGCATGGGGATGATGCCGTTGGAG 769503 Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGAC 54308 | ||| ||||| |||| || ||| ||| ||||||| || | | ||| |||| Sbjct 769504 GTACCGTTGGTACCGGCAATGTAGGAGCCAGTGGCACGGATGCAGTGGGCGTTG--AGAC 769561 Query 54309 CTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 54368 | || || || ||| | || ||||| | || || || | || || ||||| || | Sbjct 769562 CAATGCCACCGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCGT 769621 Query 54369 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 54428 | || || |||||| |||||| | || || || ||||| ||| | || | Sbjct 769622 CAATGCTGTCATCCTTCATGTCGACGAGGAAGCACGAAGACAGCTGGGCCTGGGGGGTAC 769681 Query 54429 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 54488 | || || || | ||| || || ||||| || || || || || | || ||||||| Sbjct 769682 CAGCGTTGAAGAGGGTGGGCGAGGCGTGGGTGAAGCACTTGCTCGACATGAGGTTGTACG 769741 Query 54489 TCTCGAT----AGCT-GA-GTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTA 54542 |||| || ||| || || | |||| |||| || || || |||||||| | Sbjct 769742 TCTCAATGACACGCTCGATGTTGTCACCCCA--GATG----CCGACGGCAACACGCATGA 769795 Query 54543 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCA 54602 ||||||||| || | || || |||||| || | || |||| |||||| || | Sbjct 769796 TCATGTGCTGGGGACGCTCGACAATCTTGCCGTCGAGCTTGAGCAGGTAGGAGCGCTCAA 769855 Query 54603 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGA 54662 ||| || |||||||| || | ||| ||||| || ||||| | ||| | |||| || Sbjct 769856 GAGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCACGGTCGTAGACAATGGCCGAGTCGA 769915 Query 54663 GTTTATCCTT 54672 | | ||||| Sbjct 769916 GCTCGTCCTT 769925 >seq1461 Length=46181 Score = 118 bits (130), Expect = 1e-21 Identities = 362/557 (65%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || ||||| ||| ||| ||||||||||| | || | |||||||| || || || Sbjct 33241 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGA 33182 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 |||||||| || |||||||| || ||||| || ||||| ||||| | ||| ||||| Sbjct 33181 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCTCCGCTGAAGAAG 33122 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG---CGCTGTCATGT 24311 || || || || || |||||||||| || | | || | || | |||| || Sbjct 33121 ATACCCTCGACGGCGGCAAAGGCAACCAGACGCTGGGCAAAGGTGGAGTCCTTGTCCTGG 33062 Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 24371 |||||| | ||||| ||||||||||| | || || || ||||| || || || Sbjct 33061 ATCCACCTGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTG 33002 Query 24372 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 24431 ||||| ||| | | || || | || || ||||| | ||| || | Sbjct 33001 AAGAGGTAGGCGCGCTGGGCGGTCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTC 32942 Query 24432 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 24491 || || || ||||| || || || || || |||||||| || | |||||||| ||| Sbjct 32941 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATC 32882 Query 24492 TGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 24551 || || || | || || || | | || ||||| || || || ||| ||| || Sbjct 32881 TGGACCTCGCCGCTGAAACGCTCGACAAGGTTCTCATTGACAATGCCATCAGAGGCGGCG 32822 Query 24552 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGT--GTTAGTTTATTCCAA 24608 || || || | | || || || | || ||||| | || | | || ||||| Sbjct 32821 AAGAAGGCAAGGATGTGGGAGATGAAGAACTTCTCGTCATCGTTGATGCGGTTGTTCCAG 32762 Query 24609 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 24668 || | || || || || | || | || || | ||||| || || ||||| ||||| Sbjct 32761 TCGTGGAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTC 32702 Query 24669 TTATACATATTCCAGAT 24685 || ||||| | |||||| Sbjct 32701 TTGTACATCTGCCAGAT 32685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593708100255120