Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1461 340 2e-88 seq805 149 6e-31 seq1475 138 1e-27 seq1774 123 3e-23 >seq1461 Length=46181 Score = 340 bits (376), Expect = 2e-88 Identities = 567/813 (70%), Gaps = 25/813 (3%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| ||||||| | |||||| Sbjct 32685 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATTGACCTG 32744 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||||||| | ||| | ||||| ||||| |||||| Sbjct 32745 TCCAAGGACCTCCACGACTGGAACAACCGCATCAACGATGACGAGAAGTTCTTCATCTCC 32804 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | || ||||| ||||||||| || ||||| ||||| ||||| || ||||||||| Sbjct 32805 CACATCCTTGCCTTCTTCGCCGCCTCTGATGGCATTGTCAATGAGAACCTTGTCGAGCGT 32864 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| ||||| ||| | ||||||| || ||||||||||| || |||||| ||| Sbjct 32865 TTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGCTGCTTCTACGGTTTCCAGATCATGATG 32924 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAG 116932 |||||| | ||||| || | || || ||||| ||||| ||| | || Sbjct 32925 GAGAACATCCACTCCGAGACCTACTCTCTGCTCATTGACACCTACAT---------CAAG 32975 Query 116933 GAGA------AGCTC-CGT--TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAG 116983 |||| ||| | | | | || |||||||| ||||| || || ||| || || Sbjct 32976 GAGACCGCCCAGCGCGCCTACCTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAG 33035 Query 116984 AAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTG 117043 |||||||| ||||| | | |||||| | || || || |||| | | |||| ||| Sbjct 33036 AAGGCCGACTGGGCCATCAGGTGGATCCAGGACAAGGACTCCACCTTTGCCCAGCGTCTG 33095 Query 117044 GTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGG 117103 || ||||| || ||||||||||| ||||||| || || || |||| || ||| Sbjct 33096 GTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGGAGCCTTTGCTTCCATCTTCTGG 33155 Query 117104 CTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGAC 117163 |||||||| || || || |||||||| ||||| ||| ||||||||||||||| | ||| Sbjct 33156 CTCAAGAAGCGTGGTCTGATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCGCGTGAC 33215 Query 117164 GAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGC 117223 |||||||| || |||||| ||||| ||||| | || | | | || | ||| Sbjct 33216 GAGGGTCTCCACACCGACTTCGCCTGCCTGCTGCACTCTCACCTCAAGAACCGCGCTAGC 33275 Query 117224 GCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACC 117283 | | | || || ||| ||||||| || ||| |||| ||| || ||||||||| Sbjct 33276 AAGCAGGTCATCTACGACATCATCACCGATGCCGTCTCCATTGAGAAGGAGTTCCTCACC 33335 Query 117284 GAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCG 117341 || || ||||| |||| ||||| || | || || | | ||| ||| ||||| | Sbjct 33336 GACGCTCTGCC-CTGCGCCCTGCTCGGCATGAA-CGCCACCCTCATGCAGCAGTACATTG 33393 Query 117342 AGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCA 117401 |||| ||||||||| | || ||| | | || | | || |||| ||||||| || ||| Sbjct 33394 AGTTTGTCGCCGACCGTCTCCTGGTTGCCCTCGGCAACGACAAGGTCTACAACTCGACCA 33453 Query 117402 ACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 |||| | ||||| ||| | ||||||| ||| Sbjct 33454 ACCCCTTCGACTTCATGGAGAACATCTCCCTGG 33486 >seq805 Length=824856 Score = 149 bits (164), Expect = 6e-31 Identities = 153/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| |||| ||||| || | |||| | | Sbjct 371683 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATT 371742 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| |||||||||||| |||||||||| || || Sbjct 371743 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTG 371802 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || || || ||||| || |||| |||||||| ||||||||||||||||||| Sbjct 371803 ATCTTTGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAG 371862 Query 40879 GAGGCCACGCTGCATCTAGT 40898 ||| |||| ||||| || || Sbjct 371863 GAGTCCACCCTGCACCTGGT 371882 >seq1475 Length=277423 Score = 138 bits (152), Expect = 1e-27 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || || ||||| || || |||||| |||| || || | Sbjct 220425 AAGATGCAGATCTTCGTCAAGACCCTTACGGGGAAGACTATCACCCTCGAGGTGGAGTCT 220484 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | | |||| ||||| || || | ||||| ||||| |||||| |||| Sbjct 220485 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGA 220543 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || || |||| || ||||| ||||| || || | ||||| || | |||||| Sbjct 220544 CCAGCAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTGAGCGACTA 220603 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||||| |||| || || || || Sbjct 220604 CAACATCCAGAAGGAGTCCACTCTCCACCTGGT 220636 >seq1774 Length=381457 Score = 123 bits (136), Expect = 3e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||| ||||||||| | || || || | | Sbjct 141887 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCGTCG 141946 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| |||||||| ||| ||||||| Sbjct 141947 GACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 142005 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | || ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 142006 GCAGCGCCTGATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTCTCCGACTACAA 142065 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || || || || Sbjct 142066 CATCCAGAAGGAGTCGACACTCCACCTCGT 142095 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||| | || ||||| |||||||| |||| ||||| | | Sbjct 142115 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACCATCACGCTCGAGGTCGAGTCGTCG 142174 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| ||||| || || | ||||| |||||||| ||| ||||||| Sbjct 142175 GATACTATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 142233 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || ||||| || || | ||||| || |||||||| Sbjct 142234 GCAGCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACGCTGTCTGACTACAA 142293 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| | |||||||| || || Sbjct 142294 CATTCAGAAGGAGTCGACGCTGCACCTTGT 142323 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || ||||| || || || || |||| || ||| | | | Sbjct 142343 ATGCAGATTTTCGTCAAGACCCTGACGGGAAAGACGATTACTCTCGAGGTGGAATCTAGC 142402 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| ||||| ||||||||||| | ||||| Sbjct 142403 GACACTATTGACAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCA 142461 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || || || ||||| || |||| |||||||| |||||||| Sbjct 142462 GCAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTGTCTGACTACAA 142521 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| ||| || || || || Sbjct 142522 CATCCAGAAGGAGAGCACTCTTCACCTGGT 142551 Score = 116 bits (128), Expect = 4e-21 Identities = 138/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771 |||| ||||| ||||||||| |||| || || || |||||| | | | | | ||| Sbjct 141681 TCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACCATCGACAATGTGAAGT 141740 Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831 || || | ||||| |||||||| || | |||||||| || ||||||| || |||| Sbjct 141741 CGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTCATCTTTGCTGGCA 141800 Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891 | ||||| || |||| || || ||| |||||||||||||||||||||| ||| || | Sbjct 141801 AGCAGCTCGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAAGGAGAGCACCCTCC 141860 Query 40892 ATCTAGT 40898 | || || Sbjct 141861 ACCTGGT 141867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515207485203440