Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1774 120 3e-22 seq1475 120 3e-22 seq805 113 4e-20 >seq1774 Length=381457 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| ||| ||||| || || |||||||| ||| | |||||| |||||| ||||| Sbjct 142090 GTGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTG 142031 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || ||||| | || || |||||||| || || || |||||||||||||| || || Sbjct 142030 CTTGCCAGCAAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 141971 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||||| ||| ||||| | ||| | || |||||||| Sbjct 141970 GGACTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCCAGGGTGATGGTCTTGCCGGT 141911 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| |||||||| Sbjct 141910 GAGGGTCTTGACAAAGATCTGCAT 141887 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| || || ||||| |||||||||||| ||||| Sbjct 142311 GTCGACTCCTTCTGAATGTTGTAGTCAGACAGCGTGCGGCCATCCTCGAGCTGCTTTCCG 142252 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| || |||||||| || || || |||||||||||||| || || || Sbjct 142251 GCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 142192 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | || |||| ||||||||||| || | || |||||||||| || Sbjct 142191 ACGTTGTCAATAGTATCCGACGACTCGACCTCGAGCGTGATGGTCTTGCCGGTCAACGTC 142132 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 142131 TTGACGAAGATCTGCAT 142115 Score = 109 bits (120), Expect = 5e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || ||| || || |||||||| ||| | ||| || |||||| Sbjct 141867 ACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCG 141808 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| |||||||||||||||| || ||||| |||||||||||||| Sbjct 141807 AGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGG 141748 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | | ||| ||||||| ||| | || ||| Sbjct 141747 ATCTTCGACTTCACATTGTCGATGGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTG 141688 Query 118710 CCGGT 118714 ||||| Sbjct 141687 CCGGT 141683 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| || || ||||| ||||||||||| || ||||| | Sbjct 142534 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAA 142475 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| ||||||||||| || ||||| |||||||||||||| ||| || || || | Sbjct 142474 GATAAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTT 142415 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 || | ||||| | || ||||||| || | ||| || || ||||| || || || Sbjct 142414 GTCAATAGTGTCGCTAGATTCCACCTCGAGAGTAATCGTCTTTCCCGTCAGGGTCTTGAC 142355 Query 118727 AAAAATCTGCAT 118738 ||||||||||| Sbjct 142354 GAAAATCTGCAT 142343 >seq1475 Length=277423 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || ||||| || || |||||||| ||||||| |||||| |||||| Sbjct 220636 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCA 220577 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| |||| || |||||||| || || || || ||||||||||| Sbjct 220576 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 220517 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | ||| ||||||| ||| | || || Sbjct 220516 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTC 220457 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || || || |||||||| Sbjct 220456 CCCGTAAGGGTCTTGACGAAGATCTGCAT 220428 >seq805 Length=824856 Score = 113 bits (124), Expect = 4e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || ||||| || || |||||||| ||| || ||||| ||||| Sbjct 371882 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCA 371823 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| ||||| || |||| ||||||||||| || || || |||||||||||||| Sbjct 371822 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 371763 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||||| | ||||||||||| ||| | || ||| Sbjct 371762 ATCTTGGACTTGACATTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTG 371703 Query 118710 CCGGTCAGAGTTTTTACAAA 118729 || ||||| || || || || Sbjct 371702 CCCGTCAGGGTCTTCACGAA 371683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433820782386748