Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq857 105 1e-17 seq631 100 6e-16 seq982 98.7 2e-15 >seq857 Length=1029652 Score = 105 bits (116), Expect = 1e-17 Identities = 609/957 (64%), Gaps = 38/957 (4%) Strand=Plus/Minus Query 248791 GCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAA 248850 || |||| ||||| | || || | ||| | | ||||| |||||| || || ||| Sbjct 769907 GCCATTGTCTACGACCGTGACTTCAACTACCAGTACTTTGGTTTCAAGACTCTTGAGCGC 769848 Query 248851 TCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGA 248910 || || || ||||| | || |||||||| || || || ||||||||| | ||||| Sbjct 769847 TCCTACCTGCTCAAGCTCGACGGCAAGATTGTCGAGCGTCCCCAGCACATGATCATGCGT 769788 Query 248911 GTGGCTGTCGGGATTCACAAGGATGACAT-AGAGAGCGTGC--TCGAGACGTACACCGGA 248967 || || ||||| || | || ||||| | ||||||| | |||||||||| | Sbjct 769787 GTTGCCGTCGGCAT---CTGGGGTGACAACATCGAGCGTGTCATTGAGACGTACAACCTC 769731 Query 248968 ATGA-GTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAA 249026 ||| | | | | || | || || ||| | || || ||||||||||| |||||| | | Sbjct 769730 ATGTCGAGCAAG-TGCTTCACCCACGCCTCGCCCACCCTCTTCAACGCTGGTACCCCCCA 769672 Query 249027 CAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTA 249086 |||||| |||||||| || | | |||| | || ||| | ||||| || || Sbjct 769671 GGCCCAGCTGTCTTCGTGCTTCCTCGTCGACATGAAGGATGACAGCATTGACGGTATCTA 769612 Query 249087 TGACACGCTTAAACAGAC---GGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTC 249143 ||||| || | |||| || | ||| || || || || || || |||||| Sbjct 769611 CGACACCCTCA---AGACCTGTGCCATGATCTCCAAGACGGCCGGTGGCATTGGTCTCAA 769555 Query 249144 CGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGG 249203 || | | |||||| || | || || ||||| ||||| || || | | || Sbjct 769554 CGCCCACTGCATCCGTGCCACTGGCTCCTACATTGCCGGTACCAACGGTACCTCCAACGG 769495 Query 249204 TATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGG--- 249260 ||| | ||| | || || || | ||| ||| | | | || |||||| || Sbjct 769494 CATCATCCCCATGCTCCGTGTCTACAACAACACTGCCCGCTACGTCGACCAGGGTGGCAA 769435 Query 249261 ---GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGA 249317 ||||| || | ||| ||| || | || ||||||||||| | || || Sbjct 769434 CAAGCGCC---CCGGTGCTTTCTGCATCTACCTTGAGCCTTGGCACGCCGACGTCTTCGA 769378 Query 249318 GTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTA 249377 |||||| ||| | |||||| |||| || ||| | | || || ||||| ||| Sbjct 769377 GTTCCTTGACCTCCGCAAGAACCACGGAAAGGAGGAGGTCCGTGCTCGCGACCTGTTCCT 769318 Query 249378 CGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437 | ||| ||| | ||||| | |||||| || ||| || |||| || ||||| || Sbjct 769317 GGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCGAGAAGAACGGTGACTGGACCCT 769258 Query 249438 TCTTTCTCCGTCCGA-CGCCCCGGACCTCATCGATCTACACGGCGCCGACTTCGA--CCA 249494 | | || ||| ||||||| |||| ||| | ||||| | ||| || || || Sbjct 769257 CATGTGCCCCAACGAGTGCCCCGG-CCTCGCCGACGTCCACGGTGACGAGTTTGAGGCCC 769199 Query 249495 AGCCTATAAGAAATACGAATCCAACGGCATCG---GCAAGACAATCAAGGCTCGGACCCT 249551 | || |||| ||||| | ||| || ||||||| ||| |||| || || Sbjct 769198 TG--TACGAGAAGTACGAGAGGGAGGGCCGCGGCCGCAAGACGATCCGCGCTCAGAAGCT 769141 Query 249552 TTTTGCGAAGGTGGTGGAGTCCCAGATAGAGACAGGGGGGCCGTATTAT-TTGTTCAAAG 249610 | | | | ||| |||||| ||||| || || | | || | | ||| | Sbjct 769140 CTGGTACTCGATCCTCGAGGCCCAGACCGAGACTGGTAACCCCT-TCATGCTCTACAAGG 769082 Query 249611 ACGCGTGCAACGCCAAGAGTAACCAACGGCATCTTGGTACCATCCGCTCGTCAAATCTCT 249670 || |||| |||||| ||||| | | || |||||||||||| || || |||| Sbjct 769081 ACCACGCCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATCCGCAGCTCCAACCTCT 769022 Query 249671 GTGCAGAGGTGATTCAATACT-CG-TCCAAGGAGGAGATTGCCGTCTGCAACCTGGC 249725 | | ||| | ||| | |||| || ||| || ||| ||||||||||||||||||| Sbjct 769021 GCACTGAGATCATTGAGTACTGCGCTCC--CGACGAGGTTGCCGTCTGCAACCTGGC 768967 >seq631 Length=1534325 Score = 100 bits (110), Expect = 6e-16 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 254020 ACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGTTGG 254079 |||| ||||||||||| || |||||||| |||||||| || ||||| || | | | | Sbjct 1212624 ACGGCCCTCCCGGAACGGGAAAGACGTCGACCATCCTCGCCCTGGCTCGTCGCATCTACG 1212683 Query 254080 GCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGTTGG 254139 || || |||||| || || || || ||||| ||||| |||||||| || || | | Sbjct 1212684 GCACGGCCAACATGCGACAGATGGTCCTGGAGCTCAACGCCTCTGACGATCGTGGAATCG 1212743 Query 254140 ACGTCGTCCGCGACAAGATCAAGACTTT 254167 |||| || ||||| |||||||||| || Sbjct 1212744 ACGTGGTGCGCGAGCAGATCAAGACGTT 1212771 >seq982 Length=196192 Score = 98.7 bits (108), Expect = 2e-15 Identities = 264/398 (66%), Gaps = 22/398 (6%) Strand=Plus/Minus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| || || |||||||| |||||||| || || || |||||||| ||| Sbjct 19137 TGCTCTTCTACGGCCCGCCGGGAACAGGAAAGACGTCTACGATTCTAGCGCTGGC--GAA 19080 Query 254071 CC--CTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGA 254128 | || || ||| | || || | ||| ||||| ||||| ||||| || ||||| Sbjct 19079 GCAGCTCTTTGGCCCCGAGATGATCAAGTCGCGAGTGCTGGAGCTCAACGCCTCAGACGA 19020 Query 254129 ACGCGGGTTGGACGTCGTCCGCGACAAGATCAAG-ACTTT-CTC-CA---AGATGTCGAT 254182 || || | | |||||| ||| ||||| ||||| | | || || || | | Sbjct 19019 GCGAGGCATCTCGATTGTCCGCCGAAAGGTCAAGGACTTTGCGCGCATGCAGCTGACCAA 18960 Query 254183 TTCGTCGTTC-----CAACCCGG-------CTGTCCGCCTTTCAAGCTCGTGATCCTGGA 254230 || | | ||| | | ||| || || | |||| || | ||||| || Sbjct 18959 CCCGACAGCCGCCTACAAGCAGAAATACCCCTGCCCTCCCTACAAGATCATCATCCTCGA 18900 Query 254231 CGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCA 254290 |||||| ||| ||||||| ||||| ||| ||| || || || || ||||||||| | Sbjct 18899 CGAGGCCGACTCCATGACCCAGGACGCCCAGAGCGCTCTGCGTCGCACCATGGAGACGTA 18840 Query 254291 CTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCGCT 254350 | | | || || || ||||| | ||||||||||| | ||||||| |||||| Sbjct 18839 CAGCAAGATTACCCGCTTCTGCCTCATCTGCAACTACGTCACCCGCATCATCGACCCGCT 18780 Query 254351 GGCTTCTCGGTGCGCCAAGTTTCGATTCAGCACCCTCG 254388 || ||| ||| |||||| || |||| | ||||| Sbjct 18779 TGCCAGTCGATGCAGCAAGTTCCGCTTCAAGAGCCTCG 18742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073741374867392