Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1774 120 2e-22 seq1475 120 2e-22 seq805 120 2e-22 >seq1774 Length=381457 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || |||||||||||||| ||||||||||| ||| |||| |||| || Sbjct 142551 ACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCGTCCTCG 142492 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || || | ||||| ||||| ||||| | |||||||||||| | Sbjct 142491 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGA 142432 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | |||| | | |||||||| | ||||||||||| Sbjct 142431 ATCTTCGACTTGACGTTGTCAATAGTGTCGCTAGATTCCACCTCGAGAGTAATCGTCTTT 142372 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| ||||| || || || ||||| Sbjct 142371 CCCGTCAGGGTCTTGACGAAAATCTGCAT 142343 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||||||||| ||||||||||||||||||||| ||| ||| | || || || || Sbjct 142318 GTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGACAGCGTGCGGCCATCCTCGAGCTG 142259 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 ||||||||||| |||| ||||| ||||| || || | |||||||||||| || || Sbjct 142258 CTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 142199 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | ||| ||| ||||| | || || |||||||| || Sbjct 142198 GGACTTGACGTTGTCAATAGTATCCGACGACTCGACCTCGAGCGTGATGGTCTTGCCGGT 142139 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || ||||| ||||| Sbjct 142138 CAACGTCTTGACGAAGATCTGCAT 142115 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||||||| || ||| | || || || || || || || || Sbjct 142078 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAA 142019 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| ||||| ||||| || || | |||||||||||| || || ||| || Sbjct 142018 AATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 141959 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | ||||| ||| ||||||| ||| || |||||||| || || ||||| || Sbjct 141958 GTCGATGGTGTCCGACGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 141899 Query 45325 AAAGATTTGCAT 45336 |||||| ||||| Sbjct 141898 AAAGATCTGCAT 141887 >seq1475 Length=277423 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| ||||||||| |||||||||||| |||| ||| | || || Sbjct 220636 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCA 220577 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| ||||| ||||| || || | ||||||||||||| Sbjct 220576 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 220517 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||||||||| | ||| || ||||| Sbjct 220516 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTC 220457 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343 ||||| || ||||| || ||||| ||||| |||||| Sbjct 220456 CCCGTAAGGGTCTTGACGAAGATCTGCATCTTGCCT 220421 >seq805 Length=824856 Score = 120 bits (132), Expect = 2e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| ||| ||||||||| |||||||||||| ||| ||| |||| || Sbjct 371882 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCA 371823 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || |||||||| || |||| ||||| ||||| || || | |||||||||||| Sbjct 371822 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 371763 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| ||| ||||| | ||| || |||||| Sbjct 371762 ATCTTGGACTTGACATTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTG 371703 Query 45308 CCCGTCAGAGTCTTCACAAAG 45328 |||||||| |||||||| ||| Sbjct 371702 CCCGTCAGGGTCTTCACGAAG 371682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395066441553199