Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1461 114 3e-20 seq857 109 1e-18 >seq1461 Length=46181 Score = 114 bits (126), Expect = 3e-20 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||||||||| || || || || |||||||| || || || || || ||||| |||||| Sbjct 33096 GTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGGAGCCTTTGCTTCCATCTTCTGG 33155 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | ||| | |||| ||||| |||| |||||| ||| |||| || | ||| Sbjct 33156 CTCAAGAAGCGTGGTCTGATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCGCGTGAC 33215 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTG 102070 || ||||| || |||||| || ||| ||||| Sbjct 33216 GAGGGTCTCCACACCGACTTCGCCTGCCTGCTG 33248 >seq857 Length=1029652 Score = 109 bits (120), Expect = 1e-18 Identities = 177/252 (70%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || || || ||||||||||| || || ||| || || || || ||||| |||||| Sbjct 769567 CCACCGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCGTCAATG 769626 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911 || ||||| | | | | | ||||||||||| || || |||| | || ||| Sbjct 769627 CTGTCATCCTTCATGTCGACGAGGAAGCACGAAGACAGCTGGGCCTGGGGGGTACCAGCG 769686 Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971 || || || ||||| || || ||||| || | | ||||||||||| | || || ||| Sbjct 769687 TTGAAGAGGGTGGGCGAGGCGTGGGTGAAGCACTTGCTCGACATGAGGTTGTACGTCTCA 769746 Query 94972 ATGACAGATTTGATG-TCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030 |||||| | |||| | | | || | |||||||| || |||||||| ||||||| ||| Sbjct 769747 ATGACACGCTCGATGTTGTCACCCCAG-ATGCCGACGGCAACACGCATGATCATGTGCTG 769805 Query 95031 AGGGCGCTCAAC 95042 || ||||| || Sbjct 769806 GGGACGCTCGAC 769817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989560936817145