Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq857 150 2e-31 seq1461 131 2e-25 >seq857 Length=1029652 Score = 150 bits (166), Expect = 2e-31 Identities = 448/685 (65%), Gaps = 16/685 (2%) Strand=Plus/Plus Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293 || ||||| | | ||| || |||| | || || || ||||| ||||| || |||||| Sbjct 769249 GGGCACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATC 769308 Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63353 || || || | || || || | | | ||||| ||||| ||||| || Sbjct 769309 CAGAGGGCCAGGAACAGGTCGCGAGCACGGACCTCCTCCTTTCCGTGGTTCTTGCGGAGG 769368 Query 63354 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63413 || |||||| | | | || | ||||| || || | ||| ||| | | | || || Sbjct 769369 TCAAGGAACTCGAAGACGTCGGCGTGCCAAGGCTCAAGGTAGATGCAGAAAGCACCGGGG 769428 Query 63414 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63473 || ||||| || ||||| || | ||| | || ||||| || || || | | ||| || Sbjct 769429 CGCTTGTTGCCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGTAGACACGGAGCATGGGG 769488 Query 63474 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--AT 63531 || || ||||| || |||| |||||||||| || ||| ||| ||||||| || | Sbjct 769489 ATGATGCCGTTGGAGGTACCGTTGGTACCGGCAATGTAGGAGCCAGTGGCACGGATGCAG 769548 Query 63532 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63591 | |||| |||| || || || ||| | || ||||| | || || || | | Sbjct 769549 TGGGCGTTGA--GACCAATGCCACCGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGG 769606 Query 63592 TGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTT 63651 |||| ||||| || || ||||| ||||| |||||| | || || || ||||| | Sbjct 769607 TGTCGTAGATACCGTCAATGCTGTCATCCTTCATGTCGACGAGGAAGCACGAAGACAGCT 769666 Query 63652 GGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 63711 || | | || || || || || | ||| || || ||||| || || || || | Sbjct 769667 GGGCCTGGGGGGTACCAGCGTTGAAGAGGGTGGGCGAGGCGTGGGTGAAGCACTTGCTCG 769726 Query 63712 AAAGTAGATTGTACGTCTCAAT----AGCT-GA-GTCTATATCCCATTGATGAATTCCTA 63765 | | || |||||||||||||| ||| || || | |||| |||| || | Sbjct 769727 ACATGAGGTTGTACGTCTCAATGACACGCTCGATGTTGTCACCCCA--GATG----CCGA 769780 Query 63766 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACA 63825 | || |||||||| | ||||||||| || | || ||||| ||| || | || | || Sbjct 769781 CGGCAACACGCATGATCATGTGCTGGGGACGCTCGACAATCTTGCCGTCGAGCTTGAGCA 769840 Query 63826 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAA 63885 |||||| || | ||| || |||||||| || | ||| ||||| || ||||| | Sbjct 769841 GGTAGGAGCGCTCAAGAGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCACGGTCGTAGA 769900 Query 63886 TAATAACCGAATTGAGCTTATCCTT 63910 ||| |||| | ||||| ||||| Sbjct 769901 CAATGGCCGAGTCGAGCTCGTCCTT 769925 >seq1461 Length=46181 Score = 131 bits (144), Expect = 2e-25 Identities = 365/557 (66%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || ||||| ||| ||| ||||||||||| | || | ||||| || || || || Sbjct 33241 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGA 33182 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| || |||||||| || ||||| || |||||||| || | |||| |||||| Sbjct 33181 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCTCCGCTGAAGAAG 33122 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 33758 || || || || || |||||||||| || | || || | || | |||| || Sbjct 33121 ATACCCTCGACGGCGGCAAAGGCAACCAGACGCTGGGCAAAGGTGGAGTCCTTGTCCTGG 33062 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 |||||| | ||||| ||||||||||| | || || || || || ||||| || Sbjct 33061 ATCCACCTGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTG 33002 Query 33819 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33878 ||||| ||| | | || || | || || || || | ||| || | Sbjct 33001 AAGAGGTAGGCGCGCTGGGCGGTCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTC 32942 Query 33879 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33938 || || || ||||| || || ||||| || |||||||| || | |||||||| ||| Sbjct 32941 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATC 32882 Query 33939 TGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCA 33998 || || || | || || || | | || ||||| || || |||||| ||| || Sbjct 32881 TGGACCTCGCCGCTGAAACGCTCGACAAGGTTCTCATTGACAATGCCATCAGAGGCGGCG 32822 Query 33999 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGT--GTTAGTTTATTCCAA 34055 || || || | | || || || | || ||||| | || | | || ||||| Sbjct 32821 AAGAAGGCAAGGATGTGGGAGATGAAGAACTTCTCGTCATCGTTGATGCGGTTGTTCCAG 32762 Query 34056 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 34115 || | || || || || | || | || || | ||||| || || ||||| ||||| Sbjct 32761 TCGTGGAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTC 32702 Query 34116 TTATACATATTCCAGAT 34132 || ||||| | |||||| Sbjct 32701 TTGTACATCTGCCAGAT 32685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629803279522320