Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq857 127 3e-24 seq1461 122 1e-22 >seq857 Length=1029652 Score = 127 bits (140), Expect = 3e-24 Identities = 443/685 (65%), Gaps = 16/685 (2%) Strand=Plus/Plus Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086 || ||||| | | ||| || |||| | || || || ||||| ||||| || |||||| Sbjct 769249 GGGCACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATC 769308 Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146 || || || | || | || | | | ||||| ||||| ||||| || Sbjct 769309 CAGAGGGCCAGGAACAGGTCGCGAGCACGGACCTCCTCCTTTCCGTGGTTCTTGCGGAGG 769368 Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206 || |||||| | | | || ||||| || || | ||| ||| | | | || || Sbjct 769369 TCAAGGAACTCGAAGACGTCGGCGTGCCAAGGCTCAAGGTAGATGCAGAAAGCACCGGGG 769428 Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266 || ||||| || ||||| || | ||| | || ||||| || || || | | ||| || Sbjct 769429 CGCTTGTTGCCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGTAGACACGGAGCATGGGG 769488 Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--AT 66324 || || || ||||| ||||| ||||| |||| || ||| ||| | ||||| || | Sbjct 769489 ATGATGCCGTTGGAGGTACCGTTGGTACCGGCAATGTAGGAGCCAGTGGCACGGATGCAG 769548 Query 66325 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 66384 | |||| |||| || || || ||| | || ||||| | || || || | | Sbjct 769549 TGGGCGTTGA--GACCAATGCCACCGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGG 769606 Query 66385 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 66444 | || ||||| || || || || |||||| |||||| | || || || ||||| | Sbjct 769607 TGTCGTAGATACCGTCAATGCTGTCATCCTTCATGTCGACGAGGAAGCACGAAGACAGCT 769666 Query 66445 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 66504 || | || || || || || | ||| || || ||||| || || || || | Sbjct 769667 GGGCCTGGGGGGTACCAGCGTTGAAGAGGGTGGGCGAGGCGTGGGTGAAGCACTTGCTCG 769726 Query 66505 AAAGTAGATTGTACGTCTCAAT----AGCT-GA-GTCTATATCCCATTGATGAATTCCTA 66558 | | || |||||||||||||| ||| || || | |||| |||| || | Sbjct 769727 ACATGAGGTTGTACGTCTCAATGACACGCTCGATGTTGTCACCCCA--GATG----CCGA 769780 Query 66559 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACA 66618 | || |||||||| | ||||||||| || | || || |||||| || | || | || Sbjct 769781 CGGCAACACGCATGATCATGTGCTGGGGACGCTCGACAATCTTGCCGTCGAGCTTGAGCA 769840 Query 66619 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAA 66678 |||||| || | ||| || |||||||| || | ||| ||||| || ||||| | Sbjct 769841 GGTAGGAGCGCTCAAGAGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCACGGTCGTAGA 769900 Query 66679 TAATAACCGAGTTGAGTTTATCCTT 66703 ||| |||||| ||| | ||||| Sbjct 769901 CAATGGCCGAGTCGAGCTCGTCCTT 769925 >seq1461 Length=46181 Score = 122 bits (134), Expect = 1e-22 Identities = 363/557 (65%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || ||||| ||| ||| ||||||||||| | || | |||||||| || || || Sbjct 33241 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGA 33182 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 |||||||| || |||||||| || ||||| || ||||| ||||| | ||| ||||| Sbjct 33181 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCTCCGCTGAAGAAG 33122 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 36334 || || || || || |||||||||| || | || || | || | |||| || Sbjct 33121 ATACCCTCGACGGCGGCAAAGGCAACCAGACGCTGGGCAAAGGTGGAGTCCTTGTCCTGG 33062 Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394 |||||| | ||||| ||||||||||| | || || || ||||| || || || Sbjct 33061 ATCCACCTGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTG 33002 Query 36395 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 36454 ||||| ||| | | || || | || || ||||| | ||| || | Sbjct 33001 AAGAGGTAGGCGCGCTGGGCGGTCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTC 32942 Query 36455 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 36514 || || || ||||| || || || || || |||||||| || | |||||||| ||| Sbjct 32941 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATC 32882 Query 36515 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 36574 || || || | || || || | | || ||||| || || || ||| ||| || Sbjct 32881 TGGACCTCGCCGCTGAAACGCTCGACAAGGTTCTCATTGACAATGCCATCAGAGGCGGCG 32822 Query 36575 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--TTGGTG-TTAGTTTATTCCAA 36631 || || || | | || || || | || |||| | | || | | || ||||| Sbjct 32821 AAGAAGGCAAGGATGTGGGAGATGAAGAACTTCTCGTCATCGTTGATGCGGTTGTTCCAG 32762 Query 36632 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 36691 || | || || || || | || | || || | ||||| || || ||||| ||||| Sbjct 32761 TCGTGGAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTC 32702 Query 36692 TTATACATATTCCAGAT 36708 || ||||| | |||||| Sbjct 32701 TTGTACATCTGCCAGAT 32685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658157834795960