Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq857 150 3e-31 seq1461 136 6e-27 >seq857 Length=1029652 Score = 150 bits (166), Expect = 3e-31 Identities = 475/730 (65%), Gaps = 16/730 (2%) Strand=Plus/Plus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 || |||||||| || || ||| | | || || || |||| || ||||| | | | Sbjct 769204 TCAAACTCGTCACCGTGGACGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGGGTC 769263 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || || || | | || || || ||||| ||||| || |||||||| || || | || Sbjct 769264 CAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAAC 769323 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 || || | | | |||||| ||||| ||||| || || |||||| | | Sbjct 769324 AGGTCGCGAGCACGGACCTCCTCCTTTCCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAG 769383 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 | || | ||||| || || | ||| ||| | | | || || || ||||| || ||| Sbjct 769384 ACGTCGGCGTGCCAAGGCTCAAGGTAGATGCAGAAAGCACCGGGGCGCTTGTTGCCACCC 769443 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 || || | ||| | || ||||| || || || | | ||| || || || || ||||| Sbjct 769444 TGGTCGACGTAGCGGGCAGTGTTGTTGTAGACACGGAGCATGGGGATGATGCCGTTGGAG 769503 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGAC 80218 ||||| ||||| |||| || ||| ||| ||||||| || | | |||| ||| Sbjct 769504 GTACCGTTGGTACCGGCAATGTAGGAGCCAGTGGCACGGATGCAGTGGGCGTTGA--GAC 769561 Query 80219 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 80278 | || || || ||| | || ||||| | || || || | || || ||||| || | Sbjct 769562 CAATGCCACCGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCGT 769621 Query 80279 CTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 80338 | ||||| ||||| |||||| | || || || ||||| ||| | || | Sbjct 769622 CAATGCTGTCATCCTTCATGTCGACGAGGAAGCACGAAGACAGCTGGGCCTGGGGGGTAC 769681 Query 80339 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG 80398 | || || || | ||| || || ||||| || || || || |||| || ||||||| Sbjct 769682 CAGCGTTGAAGAGGGTGGGCGAGGCGTGGGTGAAGCACTTGCTCGACATGAGGTTGTACG 769741 Query 80399 TCTCAAT----AGCT-GATTCTAT-ATCCCATTGATGAATTCCTACCGCGACACGCATTA 80452 ||||||| ||| ||| | | | |||| |||| || || || |||||||| | Sbjct 769742 TCTCAATGACACGCTCGATGTTGTCACCCCA--GATG----CCGACGGCAACACGCATGA 769795 Query 80453 ACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCA 80512 ||||||||| || | || || |||||| | | || | || ||| || || | Sbjct 769796 TCATGTGCTGGGGACGCTCGACAATCTTGCCGTCGAGCTTGAGCAGGTAGGAGCGCTCAA 769855 Query 80513 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 80572 ||| || |||||||| || | ||| ||||| || ||||| | ||| |||||| || Sbjct 769856 GAGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCACGGTCGTAGACAATGGCCGAGTCGA 769915 Query 80573 GTTTATCCTT 80582 | | ||||| Sbjct 769916 GCTCGTCCTT 769925 >seq1461 Length=46181 Score = 136 bits (150), Expect = 6e-27 Identities = 366/557 (66%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| ||| ||| ||||||||||| | || || |||||||| || || || Sbjct 33241 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGA 33182 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| || |||||||| || ||||| || ||||| ||||| | || |||||| Sbjct 33181 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCTCCGCTGAAGAAG 33122 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGT 50136 || || || || |||||||||||||| || | || || | ||| | |||| || Sbjct 33121 ATACCCTCGACGGCGGCAAAGGCAACCAGACGCTGGGCAAAGGTGGAGTCCTTGTCCTGG 33062 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 |||||| | ||||| ||||||||||| | || || || || || ||||| || Sbjct 33061 ATCCACCTGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTG 33002 Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256 ||||| ||| | | || || | || || || || | ||| || | Sbjct 33001 AAGAGGTAGGCGCGCTGGGCGGTCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTC 32942 Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316 || || || ||||| || || ||||| || |||||||| || | |||||||| ||| Sbjct 32941 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATC 32882 Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376 || || || | || || || | | || ||||| || || || ||| ||| || Sbjct 32881 TGGACCTCGCCGCTGAAACGCTCGACAAGGTTCTCATTGACAATGCCATCAGAGGCGGCG 32822 Query 50377 AAAAACGCCAATACATGTTTTATAAAATGTTTTTCGT--TGGGTG-TTAGTTTATTCCAA 50433 || || || | | || || || || |||| | | || | | || ||||| Sbjct 32821 AAGAAGGCAAGGATGTGGGAGATGAAGAACTTCTCGTCATCGTTGATGCGGTTGTTCCAG 32762 Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493 || | || || || || | || | || || | ||||| || || ||||| ||||| Sbjct 32761 TCGTGGAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTC 32702 Query 50494 TTATACATATTCCAGAT 50510 || ||||| | |||||| Sbjct 32701 TTGTACATCTGCCAGAT 32685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718252468363160