Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1461 233 3e-56 seq857 150 3e-31 >seq1461 Length=46181 Score = 233 bits (258), Expect = 3e-56 Identities = 576/857 (67%), Gaps = 49/857 (6%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| ||||||| || ||||| | ||| ||| | || ||| Sbjct 32685 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATTGACCTG 32744 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGA----GTTTAT 125134 ||||||||||| |||| ||| | | || | | || ||| ||||| || || Sbjct 32745 TCCAAGGACCTCCACGACTGGAACAACCGCATCAACGA---TGA-CGAGAAGTTCTTCAT 32800 Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGA 125193 || ||||| | |||||||| |||| ||| ||||| || ||||| || || | ||| || Sbjct 32801 CTCCCACATCCTTGCCTTCTTCGCCGCCTCTGATGGCATTGTCAATGAGAACCTTGTCGA 32860 Query 125194 CACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATC 125252 || ||| ||| | || || |||| ||| ||||| ||||| ||||| ||| Sbjct 32861 -GCGTTTCAGCGGCGAGGTCCAGATCCCCGAGG-CTCGCTGCTTCTACGGTTTCCAGATC 32918 Query 125253 ATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT--TCGCG 125310 ||||| |||||| | ||||| || | |||||| || ||||||| ||||| | | Sbjct 32919 ATGATGGAGAACATCCACTCCGAGACCTACTCTCTGCTCATTGACACCTACATCAAGGAG 32978 Query 125311 ATC-CGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAA 125369 | | | || || || ||||| ||||| || || || | || | || || || Sbjct 32979 ACCGCCCAGCGCGCCTAC---CTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAG 33035 Query 125370 AAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTG 125429 ||||| | |||| || |||||||| | ||| | | || | | ||| | | ||| Sbjct 33036 AAGGCCGACTGGGCCATCAGGTGGATCCAGGACAAGGACTCCACCTTTGCCCAGCGTCTG 33095 Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 || || || |||||||| ||||| |||||||| || ||||| ||||||| ||| Sbjct 33096 GTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGGAGCCTTTGCTTCCATCTTCTGG 33155 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 ||||||||||| || || |||||||| ||||| | |||||| | || || || ||| Sbjct 33156 CTCAAGAAGCGTGGTCTGATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCGCGTGAC 33215 Query 125550 GAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGC 125609 ||||| || ||| ||||| ||| || ||| ||| || | | Sbjct 33216 GAGGGTCTCCACACCGACTTCGCCTGCCTGCTG------CACTCTCACC--------TCA 33261 Query 125610 AGATCCAGCGAT-GAAA--AGGTCAT---CAACATTGTAACCGATGCCGTGAGGATAGAA 125663 ||| || ||| | | || ||||||| | |||| | ||||||||||| || || Sbjct 33262 AGAACC-GCGCTAGCAAGCAGGTCATCTACGACATCATCACCGATGCCGTCTCCATTGAG 33320 Query 125664 CAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATG 125723 | ||||| || ||||| | || || | | || | ||||||||| || || ||| Sbjct 33321 AAGGAGTTCCTCACCGACGCTCTGCCCTGCGCCCTGCTCGGCATGAACGCCACCCTCATG 33380 Query 125724 TGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG--ATTGGC--CG-CA 125778 ||||||| |||||||| || || ||||| ||| |||| | ||| || || Sbjct 33381 CAGCAGTACATTGAGTTTGTCGCCGACCGTCTCCTG-----GTTGCCCTCGGCAACGACA 33435 Query 125779 AGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGA 125838 || | |||||| | | || ||||| || |||||| | ||| || || | || |||| Sbjct 33436 AGGTCTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGAAAGA 33495 Query 125839 CCAACTTTTTCGAGAAG 125855 ||||||| ||||||||| Sbjct 33496 CCAACTTCTTCGAGAAG 33512 >seq857 Length=1029652 Score = 150 bits (166), Expect = 3e-31 Identities = 373/557 (67%), Gaps = 12/557 (2%) Strand=Plus/Minus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865 || ||||| | | ||| ||| | | || |||||| | | ||||| || || | || Sbjct 769514 ACCAACGGTACCTCCAACGGCATCATCCCCATGCTCCGTGTCTACAACAACACTGCC-CG 769456 Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925 ||||| ||||| ||||| || || || || ||| | | ||||| | || ||||| Sbjct 769455 CTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCTTTCTGCATCTACCTTGAGCCTTG 769396 Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985 |||||| ||||| || || || | || | ||||| ||| || || |||| || Sbjct 769395 GCACGCCGACGTCTTCGAGTTCCTTGACCTCCGCAAGAACCACGGAAAGGAGGAGGTCCG 769336 Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AA 97042 || | ||| |||| || |||||| | || || | ||||||||||| ||| || Sbjct 769335 TGCTCGCGACCTGTTCCTGGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCGAGAA 769276 Query 97043 CGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTG 97102 |||||| |||||| ||| ||||||||| || || ||||| || |||| | Sbjct 769275 GAACGGTG---ACTGGACCCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACGTCCA 769219 Query 97103 GGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGAC 97161 || || |||||||||||| |||| | |||||| |||||||| || |||| Sbjct 769218 CGGTGACGAGTTTGAGGCCCTGTACGAGAAGTACGAGAGGGAGGGCCGCGGCCGCAAGAC 769159 Query 97162 GAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACT 97220 || || || | |||| || ||| | | ||| | ||| ||| |||||||| | Sbjct 769158 GA-TCCGCGCTC-AGAAGCTCTGGTACTCGATCCTCGAGGCCCAGACCGAGACTGGTAAC 769101 Query 97221 CCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACC 97280 || | ||| ||||||||||| || || ||||| |||||||| || |||| ||| Sbjct 769100 CCCTTCATGCTCTACAAGGACCACGCCAACCGCAAGAGCAACCAGAAGAACCTGGGTACC 769041 Query 97281 ATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCA 97340 ||| ||||||| || ||||| || || | |||||| | |||| |||||| || Sbjct 769040 ATCCGCAGCTCCAACCTCTGCACTGAGATCATTGAGTACTGCGCTCCCGACGAGGTTGCC 768981 Query 97341 GTTTGCGTTCTGGCATC 97357 || ||| ||||| || Sbjct 768980 GTCTGCAACCTGGCCTC 768964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741042350166440