Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24]
1,819 sequences; 29,823,260 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq1475 102 7e-17
seq1774 84.2 2e-11
>seq1475
Length=277423
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||| ||| | ||| || ||||| || | ||| || ||||||| |||| | ||||||
Sbjct 220636 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCA 220577
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || || ||||||| | | ||||| || || || ||||| || ||||| |
Sbjct 220576 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 220517
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || | ||||||| | ||| ||||| | || || || | ||||| || ||
Sbjct 220516 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTC 220457
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| ||||| || || || |||||||||||
Sbjct 220456 CCCGTAAGGGTCTTGACGAAGATCTGCAT 220428
>seq1774
Length=381457
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863
||||| || || ||||| || | ||| || || || ||| | |||||| |||||
Sbjct 142318 GTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGACAGCGTGCGGCCATCCTCGAGCTG 142259
Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923
|||||| | ||||| | | ||||| || || ||||| || || ||||| | || ||
Sbjct 142258 CTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 142199
Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
| ||||||| | | | ||| || | ||||| || | ||||||||| || || ||
Sbjct 142198 GGACTTGACGTTGTCAATAGTATCCGACGACTCGACCTCGAGCGTGATGGTCTTGCCGGT 142139
Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007
| || || || |||||||||||
Sbjct 142138 CAACGTCTTGACGAAGATCTGCAT 142115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448281006978840
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |