Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq24 100 4e-17 seq1119 96.9 5e-16 >seq24 Length=834752 Score = 100 bits (110), Expect = 4e-17 Identities = 85/102 (83%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAG-ATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| | |||| || | ||||| || || ||||||||||| |||| Sbjct 820855 CGCCAAGCGTCACCGCA-AGATCTTGAAGGACAACATTCAGGGTATCACCAAGCCTGCTA 820913 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||||||||||||| |||||||| || ||||||||| |||||| Sbjct 820914 TCCGTCGTCTGGCCCGTCGTGGCGGTGTCAAGCGTATCTCTG 820955 >seq1119 Length=646525 Score = 96.9 bits (106), Expect = 5e-16 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || |||||||| || ||||||||||| |||||||||||||| || ||||||||||| ||| Sbjct 384617 GACAACATCCAGGGTATCACCAAGCCCGCTATCCGTCGTCTCGCGCGTCGTGGTGGTGTC 384558 Query 16520 AAGCGTGTCTCTG 16532 |||||| |||||| Sbjct 384557 AAGCGTATCTCTG 384545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073536875567