Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq857 150 2e-31 seq1461 131 2e-25 >seq857 Length=1029652 Score = 150 bits (166), Expect = 2e-31 Identities = 448/685 (65%), Gaps = 16/685 (2%) Strand=Plus/Plus Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63242 || ||||| | | ||| || |||| | || || || ||||| ||||| || |||||| Sbjct 769249 GGGCACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATC 769308 Query 63243 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63302 || || || | || || || | | | ||||| ||||| ||||| || Sbjct 769309 CAGAGGGCCAGGAACAGGTCGCGAGCACGGACCTCCTCCTTTCCGTGGTTCTTGCGGAGG 769368 Query 63303 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63362 || |||||| | | | || | ||||| || || | ||| ||| | | | || || Sbjct 769369 TCAAGGAACTCGAAGACGTCGGCGTGCCAAGGCTCAAGGTAGATGCAGAAAGCACCGGGG 769428 Query 63363 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63422 || ||||| || ||||| || | ||| | || ||||| || || || | | ||| || Sbjct 769429 CGCTTGTTGCCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGTAGACACGGAGCATGGGG 769488 Query 63423 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--AT 63480 || || ||||| || |||| |||||||||| || ||| ||| ||||||| || | Sbjct 769489 ATGATGCCGTTGGAGGTACCGTTGGTACCGGCAATGTAGGAGCCAGTGGCACGGATGCAG 769548 Query 63481 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63540 | |||| |||| || || || ||| | || ||||| | || || || | | Sbjct 769549 TGGGCGTTGA--GACCAATGCCACCGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGG 769606 Query 63541 TGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTT 63600 |||| |||||||| || ||||| ||||| |||||| | || || || ||||| | Sbjct 769607 TGTCGTAGATACCGTCAATGCTGTCATCCTTCATGTCGACGAGGAAGCACGAAGACAGCT 769666 Query 63601 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 63660 || | || || || || || | ||| || || ||||| || || || || | Sbjct 769667 GGGCCTGGGGGGTACCAGCGTTGAAGAGGGTGGGCGAGGCGTGGGTGAAGCACTTGCTCG 769726 Query 63661 AAAGTAGATTGTACGTCTCAAT----AGCT-GA-GTCTATATCCCATTGATGAATTCCTA 63714 | | || |||||||||||||| ||| || || | |||| |||| || | Sbjct 769727 ACATGAGGTTGTACGTCTCAATGACACGCTCGATGTTGTCACCCCA--GATG----CCGA 769780 Query 63715 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACA 63774 | || |||||||| | ||||||||| || | || || |||||| || | || | || Sbjct 769781 CGGCAACACGCATGATCATGTGCTGGGGACGCTCGACAATCTTGCCGTCGAGCTTGAGCA 769840 Query 63775 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAA 63834 |||||| || | ||| || |||||||| || | ||| ||||| || ||||| | Sbjct 769841 GGTAGGAGCGCTCAAGAGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCACGGTCGTAGA 769900 Query 63835 TAATAACCGAGTTGAGTTTATCCTT 63859 ||| |||||| ||| | ||||| Sbjct 769901 CAATGGCCGAGTCGAGCTCGTCCTT 769925 >seq1461 Length=46181 Score = 131 bits (144), Expect = 2e-25 Identities = 365/557 (66%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| ||| ||| ||||||||||| | || || |||||||| || || || Sbjct 33241 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGA 33182 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| || |||||||| || ||||| || |||||||| || | ||| |||||| Sbjct 33181 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCTCCGCTGAAGAAG 33122 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 33480 || || || || || |||||||||| || | || || | || | |||| || Sbjct 33121 ATACCCTCGACGGCGGCAAAGGCAACCAGACGCTGGGCAAAGGTGGAGTCCTTGTCCTGG 33062 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 |||||| | ||||| ||||||||||| | || || || || || ||||| || Sbjct 33061 ATCCACCTGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTG 33002 Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600 ||||| ||| | | || || | || || || || | ||| || | Sbjct 33001 AAGAGGTAGGCGCGCTGGGCGGTCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTC 32942 Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660 || || || ||||| || || ||||| || |||||||| || | |||||||| ||| Sbjct 32941 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATC 32882 Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720 || || || | || || || | | || ||||| || || || ||| ||| || Sbjct 32881 TGGACCTCGCCGCTGAAACGCTCGACAAGGTTCTCATTGACAATGCCATCAGAGGCGGCG 32822 Query 33721 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGT--GTTAGTTTATTCCAA 33777 || || || | | || || || | || ||||| | || | | || ||||| Sbjct 32821 AAGAAGGCAAGGATGTGGGAGATGAAGAACTTCTCGTCATCGTTGATGCGGTTGTTCCAG 32762 Query 33778 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33837 || | || || || || | || | || || | ||||| || || ||||| ||||| Sbjct 32761 TCGTGGAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTC 32702 Query 33838 TTATACATGTTCCAGAT 33854 || ||||| | |||||| Sbjct 32701 TTGTACATCTGCCAGAT 32685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622933035738040