Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1774 102 7e-17 seq805 87.8 1e-12 seq1475 84.2 2e-11 >seq1774 Length=381457 Score = 102 bits (112), Expect = 7e-17 Identities = 165/237 (70%), Gaps = 3/237 (1%) Strand=Plus/Minus Query 16702 CATTTAC---CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTT 16758 ||||||| || || || || | || |||| || || ||| |||||| || ||||| Sbjct 142579 CATTTACTGGCCGCCACGGAGACGGAGGACCAGGTGAAGAGTGCTCTCCTTCTGGATGTT 142520 Query 16759 GTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTG 16818 |||||| | || ||| ||||||| | || || || ||| | ||||| ||||| || Sbjct 142519 GTAGTCAGACAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTG 142460 Query 16819 GTCCACAGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCC 16878 ||| ||| | |||||| ||||| ||| | | ||| || | | | | |||||||| Sbjct 142459 GTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATAGTGTCGCT 142400 Query 16879 GGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | ||| || | || || || ||||| ||||| || ||||| ||||||||||| Sbjct 142399 AGATTCCACCTCGAGAGTAATCGTCTTTCCCGTCAGGGTCTTGACGAAAATCTGCAT 142343 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||||| | || | | ||||| | || Sbjct 142089 TGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGC 142030 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| |||| || ||||| |||||| || | |||||| ||||| || | Sbjct 142029 TTGCCAGCAAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 141970 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | | ||||| | ||| |||| ||||||||| || ||||| Sbjct 141969 GACTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCCAGGGTGATGGTCTTGCCGGTG 141910 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || |||||||| |||||||| Sbjct 141909 AGGGTCTTGACAAAGATCTGCAT 141887 >seq805 Length=824856 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| ||||||||||| || ||||||||||||| || ||| | ||||| Sbjct 371885 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 371826 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || || || ||| | || || ||||| |||||| || | |||||| ||||| Sbjct 371825 TCAAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 371766 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | ||| || | | | | ||||| || ||| || | ||||||||| Sbjct 371765 TGGATCTTGGACTTGACATTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTC 371706 Query 16904 TTTCCGGTCAGCGTTTTGACAAA 16926 || || ||||| || || || || Sbjct 371705 TTGCCCGTCAGGGTCTTCACGAA 371683 >seq1475 Length=277423 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || |||||||||||| || || | | ||| Sbjct 220639 AGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCC 220580 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| ||| | || || ||||| |||||| || | ||||| ||||| Sbjct 220579 TCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 220520 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | ||| || | | | | |||||| | |||| || | |||||| || Sbjct 220519 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 220460 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || || || || || ||||| || |||||||| ||| Sbjct 220459 TTCCCCGTAAGGGTCTTGACGAAGATCTGCATCTTG 220424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405079019578810