Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq857 141 1e-28 seq1461 127 3e-24 >seq857 Length=1029652 Score = 141 bits (156), Expect = 1e-28 Identities = 473/730 (65%), Gaps = 16/730 (2%) Strand=Plus/Plus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 || |||||||| || || | | | || || || || || | || ||||| | | | Sbjct 769204 TCAAACTCGTCACCGTGGACGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGGGTC 769263 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 || || |||| | || || || ||||| ||||| || |||||||| || || | || Sbjct 769264 CAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAAC 769323 Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 || || | | | ||||| ||||| ||||| || || |||||| | | Sbjct 769324 AGGTCGCGAGCACGGACCTCCTCCTTTCCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAG 769383 Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 | || | ||||| || || | ||| ||| | | | || || || ||||| || ||| Sbjct 769384 ACGTCGGCGTGCCAAGGCTCAAGGTAGATGCAGAAAGCACCGGGGCGCTTGTTGCCACCC 769443 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 || || | ||| | || ||||| || || || | | ||| || || || || ||||| Sbjct 769444 TGGTCGACGTAGCGGGCAGTGTTGTTGTAGACACGGAGCATGGGGATGATGCCGTTGGAG 769503 Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGAC 63350 ||||| ||||| || | || ||| ||| ||||||| || | | |||| ||| Sbjct 769504 GTACCGTTGGTACCGGCAATGTAGGAGCCAGTGGCACGGATGCAGTGGGCGTTGA--GAC 769561 Query 63351 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 63410 | || || || ||| | || ||||| | || || || | || || ||||| || | Sbjct 769562 CAATGCCACCGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCGT 769621 Query 63411 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 63470 | || || |||||| |||||| | || || || ||||| ||| | || | Sbjct 769622 CAATGCTGTCATCCTTCATGTCGACGAGGAAGCACGAAGACAGCTGGGCCTGGGGGGTAC 769681 Query 63471 CCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACG 63530 | || || || | ||| || || ||||| || || || || || | || ||||||| Sbjct 769682 CAGCGTTGAAGAGGGTGGGCGAGGCGTGGGTGAAGCACTTGCTCGACATGAGGTTGTACG 769741 Query 63531 TCTCAAT----AGCT-GA-GTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTA 63584 ||||||| ||| || || | |||| |||| || || || |||||||| | Sbjct 769742 TCTCAATGACACGCTCGATGTTGTCACCCCA--GATG----CCGACGGCAACACGCATGA 769795 Query 63585 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63644 ||||||||| || | || || |||||| || | || | || |||||| || | Sbjct 769796 TCATGTGCTGGGGACGCTCGACAATCTTGCCGTCGAGCTTGAGCAGGTAGGAGCGCTCAA 769855 Query 63645 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 63704 ||| || |||||||| || | ||| ||||| || ||||| | ||| |||||| || Sbjct 769856 GAGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCACGGTCGTAGACAATGGCCGAGTCGA 769915 Query 63705 GTTTATCCTT 63714 | | ||||| Sbjct 769916 GCTCGTCCTT 769925 >seq1461 Length=46181 Score = 127 bits (140), Expect = 3e-24 Identities = 364/557 (65%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || ||||| ||| ||| ||||||||||| | || | |||||||| || || || Sbjct 33241 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGA 33182 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| || |||||||| || ||||| || ||||| ||||| | ||| ||||| Sbjct 33181 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCTCCGCTGAAGAAG 33122 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 32837 || || || || || |||||||||| || | || || | || | |||| || Sbjct 33121 ATACCCTCGACGGCGGCAAAGGCAACCAGACGCTGGGCAAAGGTGGAGTCCTTGTCCTGG 33062 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 |||||| | ||||| ||||||||||| | || || || ||||| || || || Sbjct 33061 ATCCACCTGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTG 33002 Query 32898 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957 ||||| ||| | | || || | || || ||||| | ||| || | Sbjct 33001 AAGAGGTAGGCGCGCTGGGCGGTCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTC 32942 Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017 || || || ||||| || || || || || ||||||||||| | |||||||| ||| Sbjct 32941 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATC 32882 Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077 || || || | || || || | | || ||||| || || || ||| ||| || Sbjct 32881 TGGACCTCGCCGCTGAAACGCTCGACAAGGTTCTCATTGACAATGCCATCAGAGGCGGCG 32822 Query 33078 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGT--GTTAGTTTATTCCAA 33134 || || || | | || || || | || ||||| | || | | || ||||| Sbjct 32821 AAGAAGGCAAGGATGTGGGAGATGAAGAACTTCTCGTCATCGTTGATGCGGTTGTTCCAG 32762 Query 33135 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33194 || | || || || || | || | || || | ||||| || || ||||| ||||| Sbjct 32761 TCGTGGAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTC 32702 Query 33195 TTATACATATTCCAGAT 33211 || ||||| | |||||| Sbjct 32701 TTGTACATCTGCCAGAT 32685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633617592792400