Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1461 168 7e-37 >seq1461 Length=46181 Score = 168 bits (186), Expect = 7e-37 Identities = 377/561 (67%), Gaps = 9/561 (2%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || |||||||| || | ||| ||||| || || || | ||| ||| ||| || | Sbjct 33242 GCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAG 33183 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | ||| || || ||||||||||| || || |||||||| || || || Sbjct 33182 ACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCTCCGCTGAAGAA 33123 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 ||||| || ||||| ||||| || || | ||| | |||||| | | | || | || Sbjct 33122 GATACCCTCGACGGCGGCAAAGGCAACCAGACGCTGGGCAAAGGTGGAGTCCTT-GTCCT 33064 Query 93271 -GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 |||||| | | ||||| ||||| || || || || || | || || || |||| Sbjct 33063 GGATCCACCTGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGT 33004 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGT--ATGTATGTATCGATTAACAGAGAATA 93387 | || ||||| | |||| | | | |||| | ||||| || || || | |||||| || Sbjct 33003 TGAAGAGGTAGGCGCGCTGGGCGG--TCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTA 32946 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 | || || |||| |||||||| || ||||| |||||||| || | ||| || | Sbjct 32945 GGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGG 32886 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 |||||| || || || | ||| || || || |||||||| || ||||| || || Sbjct 32885 GATCTGGACCTCGCCGCTGAAACGCTCGACAAGGTTCTCATTGACAATGCCATCAGAGGC 32826 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATC 93564 || || || || | || || || || ||||| ||||| || | | || | Sbjct 32825 GGCGAAGAAGGCAAGGATGTGGGAGATGAAGAACTTCTCGTCATCGTTGATGCGGTTGTT 32766 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||| ||| || || || || || || | || ||| | ||||| || || || || || Sbjct 32765 CCAGTCGTGGAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGC 32706 Query 93625 TTTTTTGTACATATCCCATAT 93645 || |||||||| | ||| || Sbjct 32705 CTTCTTGTACATCTGCCAGAT 32685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556848138377560