Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1774 104 2e-17 seq1475 100 2e-16 seq805 98.7 8e-16 >seq1774 Length=381457 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || |||| || || || || | | Sbjct 141887 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCGTCG 141946 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| ||||| || || || Sbjct 141947 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 142006 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| ||||| ||| | |||||| |||||| ||||||| |||||| Sbjct 142007 CAGCGCCTGATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTCTCCGACTACAAC 142066 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 142067 ATCCAGAAGGAGTCGAC 142083 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || || ||| | ||||| || |||||| | | | Sbjct 142343 ATGCAGATTTTCGTCAAGACCCTGACGGGAAAGACGATTACTCTCGAGGTGGAATCTAGC 142402 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||| ||||||||||| || || || || || Sbjct 142403 GACACTATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAG 142462 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||| || || ||| | ||||| |||||| | || || |||||| Sbjct 142463 CAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTGTCTGACTACAAC 142522 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 142523 ATCCAGAAGGA 142533 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || ||||| || || |||| || || || || | | Sbjct 142115 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACCATCACGCTCGAGGTCGAGTCGTCG 142174 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | |||| || || || ||||||||||| ||||| || || || Sbjct 142175 GATACTATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 142234 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || ||||| || ||| | |||||| |||||| | || || |||||| Sbjct 142235 CAGCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACGCTGTCTGACTACAAC 142294 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || || | || | || | || ||||||| ||| Sbjct 142295 ATTCAGAAGGAGTCGACGCTGCACCTTGTCCTTCGTCTGCGCGGTGGT 142342 Score = 95.1 bits (104), Expect = 1e-14 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || || || || |||| ||| | ||| || | || Sbjct 141683 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACCATCGACAATGTGAAGTCG 141742 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| || || || || ||||| || ||||| ||||| Sbjct 141743 AAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTCATCTTTGCTGGCAAG 141802 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGA 22409 ||| | ||||| ||| || ||||||| |||||||| || || || Sbjct 141803 CAGCTCGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAAGGA 141849 >seq1475 Length=277423 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || || || | || || || || |||| || || ||||| | Sbjct 220425 AAGATGCAGATCTTCGTCAAGACCCTTACGGGGAAGACTATCACCCTCGAGGTGGAGTCT 220484 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| ||| | ||| | |||| || || || |||||||||||||| || || || Sbjct 220485 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGAC 220544 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || || || || ||||| ||||| ||| | |||||| |||||| | ||| ||| Sbjct 220545 CAGCAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTGAGCGACTAC 220604 Query 22396 AACATTCAAAAAGAATCCAC 22415 ||||| || || || ||||| Sbjct 220605 AACATCCAGAAGGAGTCCAC 220624 >seq805 Length=824856 Score = 98.7 bits (108), Expect = 8e-16 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || || || || || | || ||| | ||| || |||| Sbjct 371698 ACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATTGACAATGTCAAGTCC 371757 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || || || || || ||||| || |||||||| || Sbjct 371758 AAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTGATCTTTGCCGGAAAG 371817 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||||||| | ||||| |||||||| || || || |||||| Sbjct 371818 CAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCCACC 371871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419718695023735