Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1461 131 3e-25 seq1715 116 8e-21 seq45 113 9e-20 seq23 89.7 1e-12 >seq1461 Length=46181 Score = 131 bits (144), Expect = 3e-25 Identities = 533/829 (64%), Gaps = 31/829 (4%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| || |||| ||||| ||||||||||||||||||||| || Sbjct 33508 TCGAAGAAGTTGGTCTTTCCACCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTC 33449 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | ||||| |||| | ||| || || || | || ||||| || |||||||| | Sbjct 33448 GAGTTGTAGACCTTGTCGTTGCCGAGGGCAACCAGGAGACGGTCGGCGACAAACTCAATG 33389 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||| || | ||||||||| | || || || | || || || | Sbjct 33388 TACTGCTGCATGAGGGTGGCGTTCATGCCGAGCAGGGCGCAGGGCAGAGCGTCGGTGAGG 33329 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG--TGCCAGAG 251797 || ||||| || ||| || || || | || | | | ||||| ||| || | Sbjct 33328 AACTCCTTCTCAATGGAGACGGCATCGGTGATGATGTCGTAGATGACCTGCTTGCTAGCG 33269 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857 ||||| || | |||| ||| || | | || | ||| |||||||||| Sbjct 33268 CG-----GTTCTTGAGGTGAGAGTGCAGCAGGCAGGCGAAGTCGGTGTGGAGACCCTCGT 33214 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 | || ||||| ||||||||| | ||| || ||||||| ||||| ||| |||||| Sbjct 33213 CACGCGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATCAGACCACGCTTCTTGAGCC 33154 Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAA 251977 ||||||| | ||||| ||| ||| | | ||||||||| | | ||||| | Sbjct 33153 AGAAGATGGAAGCAAAGGCTCCGCTGAAGAAGATACCCTCGACGGCGGCAAAGGCAACCA 33094 Query 251978 GGCGCTCAGCAAACG------ACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCT 252031 | |||| ||||| | ||||||||| || | || || ||||| | |||| Sbjct 33093 GACGCTGGGCAAAGGTGGAGTCCTTGTCCTG-GA-TCCACCTGATG-GCCCAGTCGGCCT 33037 Query 252032 TCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGT 252091 |||| | | |||||| || || || || | ||||| || |||| ||| | Sbjct 33036 TCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGGCGCGCTGGGCGGTCT 32977 Query 252092 CCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACA 252151 ||| |||| | |||| || |||||||| |||| || |||||| || | | | Sbjct 32976 CCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGA 32917 Query 252152 TCTGGTAAGCATAGAATAGACGCGCGGAAGGG-TCGGTGACTT--CCGTGGAAAAGTTGT 252208 ||||| || | ||||| || || ||| || | ||| | ||| |||| | | Sbjct 32916 TCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATCTG-GACCTCGCCGCTGAAACG--CT 32860 Query 252209 TTGCAATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGA 252268 ||| |||||| | || |||||||| | | || |||||| |||| ||| || Sbjct 32859 CGACAAGGTTCTCATTGACAATGCCATCAGAGGCGGCGAAGAAGGCAAGGATGTGGGAGA 32800 Query 252269 TGAAGTGACGCTCATCGTCGTTGA---GCTTGTCACGCCAGTCGGCAATGTCCTGATTCA 252325 ||||| ||| || ||||||| | |||| ||||||| | ||||| || Sbjct 32799 TGAAGAACTTCTCGTCATCGTTGATGCGGTTGT---TCCAGTCGTGGAGGTCCTTGGACA 32743 Query 252326 GAGGAACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACAT 252374 | || || || | |||||||| | || | | |||||||||||||| Sbjct 32742 GGTCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 32694 >seq1715 Length=270369 Score = 116 bits (128), Expect = 8e-21 Identities = 435/676 (64%), Gaps = 17/676 (3%) Strand=Plus/Minus Query 279692 GCCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCT 279751 ||| || || || || || ||||| ||||||||||||||||| || | || ||||| || Sbjct 127564 GCCCGTCGGCTCCCTCTCCGGTGGATGGAAGATGAAGCTGGCTCTGGCCCGTGCCATGCT 127505 Query 279752 ACTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGT 279811 | ||| || || ||||| ||||| || ||||| ||||||||| |||| ||||||| Sbjct 127504 CCAGCGCGCTGACGTCCTCCTGCTGGACGAGCCTACCAACCACCTGGATGTTGCCAACGT 127445 Query 279812 AGCCTGGCTAGTGTCCTACCTAACCAGTCTGAAGA---ATGTTTCTTCCCTCATTGTCTC 279868 || ||||| | | ||||| | |||| | | | | | | || || || || Sbjct 127444 TGCTTGGCTGGAGCAGTACCT--CAAGTC-GCACACCGACATCACCAGTCTGATCGTGTC 127388 Query 279869 TCACGACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCT 279928 |||||||| |||||||| || |||| | | ||| ||||| ||| || Sbjct 127387 CCACGACTCCGGCTTCCTGGACAACGTGACGACGGACATTTACCACTACGAGGCCAACAA 127328 Query 279929 GAAGCTCTCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGC 279988 |||||| || ||| || |||||||| || |||| ||||| ||||| Sbjct 127327 GAAGCTTGCCTCTTACAAGGGTAACCTGTCCAACTTTGTGGAGCTCCGCCCCGAGGCCAA 127268 Query 279989 CGCCTACTATGACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCT 280048 ||||||| |||| | |||| |||| ||| | ||||| || || | || Sbjct 127267 GAGCTACTATACCCTGTCTGCGGCCAACGCCCAGTTCAAGTTCCCCCCTCCCGGCATCCT 127208 Query 280049 GGAGGGCATCACATCAAAGGATCGCGCAATCAT--GAAGCTCCGTGGCGTCTCCTTTGCT 280106 | ||| |||| || || || || ||||| | | || |||| || | | Sbjct 127207 GACGGGTATCAAGTCGCAGACGCGTGCCATCATCCGCATGTC--GGGCGCTTCGTACACG 127150 Query 280107 TATCCCAATGGCCCCAACATCTTCAGCAGT-----GTCAACTCGCAGGTTTCTATGAACT 280161 || ||||| | ||||| || || || ||| || ||| | | || | Sbjct 127149 TACCCCAAGGCTCCCAAGCCCT--CGCTGTCGGACGTCTCCTGCCAGCTCAGTCTGTCGT 127092 Query 280162 CACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGA 280221 | || | | |||| || ||||| ||||| || ||||| ||||| ||||| | || | Sbjct 127091 CCCGCGTGGCCATCATCGGCCCCAACGGTGCCGGCAAGTCGACCCTCATCAAGATGCTTA 127032 Query 280222 CTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTT 280281 | |||||| | |||| | || || |||||| |||||| |||| || | | Sbjct 127031 CGGGCGAGGTCATCCCCACCGTCGGCAAGGTCGAGAAGCACCCCAACCTGCGTATCGGCT 126972 Query 280282 ACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAAT 280341 || || |||||||| || | ||| |||||| ||||| || | ||| || ||||| | Sbjct 126971 ACATCAAGCAGCACGCCCTCGAGCACGTCGAGATGCACCTCGAGAAGACGCCCAACCAGT 126912 Query 280342 ACATTCAGTGGCGCTA 280357 || | |||||||| || Sbjct 126911 ACCTCCAGTGGCGTTA 126896 >seq45 Length=396385 Score = 113 bits (124), Expect = 9e-20 Identities = 144/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || |||| |||||||| ||||| ||||| || ||||||||||| ||||| ||||| Sbjct 294313 CTCGCGTATTGCCGTCATTGGCCCCAACGGTGCTGGCAAGTCTACCCTGATCAACGTCCT 294254 Query 280220 GACTGGCGAGACCCAGGCC-ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGG 280278 ||||| ||| | || || || |||| | | | |||| ||||| || || | Sbjct 294253 CACTGGTGAG-CTCATCCCTACCCAGGGTGACATCTACCAGCACGAGAACATCCGTATTG 294195 Query 280279 CTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACC 280338 | ||| || |||||||||||| |||||| ||||||||||| ||| |||||| Sbjct 294194 CCTACATCAAGCAGCACGCTTTCGCCCACATTGAGAACCACCTTGACTGGACTCCCTCTG 294135 Query 280339 AATACATTCAGTGGCG 280354 | ||||| |||||||| Sbjct 294134 AGTACATCCAGTGGCG 294119 Score = 109 bits (120), Expect = 1e-18 Identities = 159/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| ||||| |||| ||||| ||||| || |||| ||||| ||||| ||| Sbjct 295128 GGTGAGGACCTGTGCAACTGCACCTTCTCCCTCGCCTACGGTGCCAAGATCCTGCTCAAC 295069 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| |||| ||||||||||| | || || ||||| ||||||||| || | Sbjct 295068 CAGACCCACCTCCGTCTCAAGCGTGGCCAGCGCTACGGTCTTTGCGGTCCCAACGGTTCC 295009 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| ||| || ||||| ||||| |||| ||| | | ||| ||||| | ||| Sbjct 295008 GGCAAGTCCACCCTCATGCGTGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 294950 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 || ||||| | ||| || | || ||||||||| | ||||| Sbjct 294949 GTCCGAGGTCAAGACCGTCTTCGTCGAGCACGACCTTGACTC 294908 >seq23 Length=618107 Score = 89.7 bits (98), Expect = 1e-12 Identities = 230/349 (66%), Gaps = 6/349 (2%) Strand=Plus/Plus Query 218465 ACTTCCAGCCCGGAAACCAGTTGGACCAGTCGAAGACCAA---CATCCCCGTCCCTGACT 218521 ||||| ||||||| | | ||||||| || | |||| |||| || | |||| Sbjct 289427 ACTTCATCCCCGGAACCTACCTGGACCACTCCA---CCAAGTCCATCACCTACAACGACT 289483 Query 218522 TCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCCAGCG 218581 | || |||||||||| || || ||| | ||| ||| || ||||| | Sbjct 289484 TTGTCAACAAGGAGCTGATCCTCTTCAGCATGGCTGACAACATGCGATCCATTCCTTCTG 289543 Query 218582 TGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGGAACC 218641 | | || || |||||||| ||||| ||| || | | ||| |||||||| |||| Sbjct 289544 TTATTGACGGTCTCAAGCCTGGACAGCGCAAGGTCATTTACGCCTGCTTCAAGCGCAACC 289603 Query 218642 TGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACC 218701 || | | || | ||||| | |||| ||||||| | |||||| | | ||||| Sbjct 289604 TGATCAAGGACAAGAAGGTGGTCGAGTTGGCTGGTTACATCTCCGAACACACAGCCTACC 289663 Query 218702 ATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCA 218761 | |||||||||||| ||| ||| | || | || |||||||| ||| ||| ||| Sbjct 289664 ACCACGGTGAGCAGTCTCTTCAGCAGACAATCATTGGTCTGGCACAGAACTTTGTCGGCT 289723 Query 218762 GTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCT 218810 |||||| | |||| || |||| |||| | |||||||| ||||| Sbjct 289724 CCAACAACGTCAACTGCCTCGAGCCCAGCGGTAACTTTGGTTCGCGTCT 289772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027812845299779