Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1774 170 4e-37 seq1475 152 9e-32 seq45 149 1e-30 seq1715 134 3e-26 >seq1774 Length=381457 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || || ||||| || |||||||| || |||||| Sbjct 142113 CCACCACGGAGGCGGAGGACGAGGTGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAG 142054 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | || ||||| || ||| Sbjct 142053 AGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCCGGGGGA 141994 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||||||||| | || || || Sbjct 141993 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGACGACTCAACC 141934 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||||||| || || |||||||||||||| || |||||||| Sbjct 141933 TCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 141887 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | || | ||| ||||| ||||| || || ||||| || || || Sbjct 142341 CCACCGCGCAGACGAAGGACAAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAC 142282 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || || | || ||||| || ||| Sbjct 142281 AGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 142222 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| || || || || | || || || Sbjct 142221 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATAGTATCCGACGACTCGACC 142162 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || || || | ||||||||||| |||||||| Sbjct 142161 TCGAGCGTGATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 142115 Score = 140 bits (154), Expect = 6e-28 Identities = 174/236 (74%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| | || || || || || | |||| ||| || ||| ||| || |||||||| | Sbjct 142577 TTTACTGGCCGCCACGGAGACGGAGGACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGT 142518 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | || || || || | || || || | |||||| || || || || || | || |||| Sbjct 142517 AGTCAGACAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGT 142458 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT- 68405 | || || ||||| |||||||| |||||||| | ||||||| || || ||||| ||| Sbjct 142457 CAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATAGTGTC-GCTA 142399 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || | || || || |||||||| |||||||||||||| |||||||| Sbjct 142398 GATTCCACCTCGAGAGTAATCGTCTTTCCCGTCAGGGTCTTGACGAAAATCTGCAT 142343 Score = 127 bits (140), Expect = 4e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || ||| ||| || |||||||| || |||||| Sbjct 141885 CCACCACGGAGGCGAAGAACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 141826 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || || || ||||| | || ||||| || ||| Sbjct 141825 AGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGA 141766 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||| || ||||||||||| | || || || Sbjct 141765 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGAGGACTCAACC 141706 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||||||||| || || |||| Sbjct 141705 TCGAGGGTGATGGTCTTGCCGGTGA 141681 >seq1475 Length=277423 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || |||||||| || |||||||| || ||| Sbjct 220654 CCACCACGGAGGCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTC 220595 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | || ||||| || || Sbjct 220594 AGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 220535 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||||||| ||||||||||| | || || || Sbjct 220534 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 220475 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || ||||| |||||||||||||| |||||||| Sbjct 220474 TCGAGGGTGATAGTCTTCCCCGTAAGGGTCTTGACGAAGATCTGCAT 220428 >seq45 Length=396385 Score = 149 bits (164), Expect = 1e-30 Identities = 669/1043 (64%), Gaps = 54/1043 (5%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| ||| ||| ||| |||||||||||||| ||| |||||| Sbjct 294119 CGCCACTGGATGTACTCAGAGGGAGTCCAGTCAAGGTGGTTCTCAATGTGGGCGAAAGCG 294178 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| | ||| || || || ||||| |||| | | ||| | || || Sbjct 294179 TGCTGCTTGATGTAGGCAATACGGATGTTCTCGTGCTGGTAGATGTCACCCTGGGTAGGG 294238 Query 225101 -TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159 || || || || |||||||| ||||| || |||| |||||| ||||| ||||||||||| Sbjct 294239 ATGAGC-TCACCAGTGAGGACGTTGATCAGGGTAGACTTGCCAGCACCGTTGGGGCCAAT 294297 Query 225160 CACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGGG-- 225217 ||| |||| || || || | ||| || | | ||| || ||||| || Sbjct 294298 GACGGCAATACGCGAGCCCAGCGAGCACTGGAAGGTGATGTT-CTC--GATCTGGGGCTT 294354 Query 225218 CCAGTTT----GGTAAGCAAAGGCCACGC------CACGCAGCTTCATGATGGCACGGTC 225267 | || || |||| || | || | ||||||| ||| || | | Sbjct 294355 CGAGGTTCCGGGGTACTGGAACGACATGTTGGTGGCACGCAG------GATAGCCTTGGC 294408 Query 225268 CTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTC 225327 ||||| | | |||||| ||||| |||||||||||||| ||| | || | | | | Sbjct 294409 CTTGGTCTTGACACCCTCGAGGAAACCGGGCTCGGGGAAGGTGAACTCGATCTCGGAGGC 294468 Query 225328 CTTCAGGTCGTAGTAAGATGCAGCCTCGGGT---CGCTTTGCCACGAAAGCAGACAGGTT 225384 || |||||||| || || ||| ||||| ||||| | | |||||| Sbjct 294469 GCCGAGCTCGTAGTAGGACTTGGCAGAGGGGACACGCTTG---ACGAACTCGGCCAGGTT 294525 Query 225385 TCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTG 225443 || ||| | |||||||| | || |||| || |||| ||| | | || Sbjct 294526 ACCACGGTAGCGCTTGAGCTTGTAGCGCT---CGTAGTGGACAACGTGCTGGACG-ACGT 294581 Query 225444 CGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCTTG 225502 ||| ||||||||||||||||| || || |||||||| | || | | || | | Sbjct 294582 TGTCGAGGAAGCCAGAGTCGTGAGAGACGATGATGGAGGTGCAGG---GGGAGTTGAT-G 294637 Query 225503 AGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGA 225562 |||| | |||||| || || ||||||||| ||||| ||||| ||||| || Sbjct 294638 AGGTACTCCTCGAGCCACTTAACATTCTTGACGTCCAGATGGTTGGTAGGCTCGTCAAGG 294697 Query 225563 AGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCC 225622 ||||| ||||||| | | || || ||| || |||| ||||||||| ||||| || Sbjct 294698 AGCAGAATGTCAGGAGCCTCGAAGACGGCACGGCACAGAGCCAGCTTCATCTTCCAACCA 294757 Query 225623 CCGGACAGGGAGCCGATTGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCCAGGAGC 225682 ||||| || | | ||| | | || | | || | || ||| | || |||| Sbjct 294758 CCGGAGAGAGCGGTGATCTCACCGGAAACCATGGCGGGGGTGAAACCGAAGTCGTTGAGC 294817 Query 225683 G---TCTGGATAATGCGCTCGGGAGAGCTG---CGAGC---GGCAACGTTGGGGTCGGAC 225733 ||| || | || || | || | ||| ||||| || || | Sbjct 294818 TGCTTCTCGACACCCTCCTGGGTCTGGTTGACACCAGCCTCGGCAAGCTTCTTCATGGTC 294877 Query 225734 GAGAGGTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTAC 225793 || | || | |||||| || | | ||| | ||||| |||||| || ||| | Sbjct 294878 CAGTCG--ATGGT----GGTCATCTCAGTGTCAGCAGAGTCAAGGTCGTGCTCGACGAAG 294931 Query 225794 ACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGG 225853 || ||| || || || | |||||| ||||| | ||| | || || ||||| Sbjct 294932 ACGGTCTTGACCTCGGACTGCTTGGGGAAACCCTCGACCTGCTCGTTGTTGATGGCACGC 294991 Query 225854 AGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTG 225913 | ||||| |||||| | |||||||||||| || ||||| | | || |||||| Sbjct 294992 ATGAGGGTGGACTTGCCGGAACCGTTGGGACCGCAAAGACCGTAGCGCTGGCCACGCTTG 295051 Query 225914 ATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAA 225973 | |||| | || ||| || ||||||||| |||| ||||| |||||||| ||| Sbjct 295052 AGACGGAGGTGGGTCTGGTTGAGCAGGATCTTGGCACCGTAGGCGAGGGAGAAGGTGCAG 295111 Query 225974 TCGCACAGGTCCTCACCCTCCTC 225996 | ||||||||||||||||||||| Sbjct 295112 TTGCACAGGTCCTCACCCTCCTC 295134 >seq1715 Length=270369 Score = 134 bits (148), Expect = 3e-26 Identities = 440/677 (65%), Gaps = 29/677 (4%) Strand=Plus/Plus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || |||||||||| |||||||||||| ||| | || ||||| |||| | || | || Sbjct 126896 TAACGCCACTGGAGGTACTGGTTGGGCGTCTTCTCGAGGTGCATCTCGACGTGCTCGAGG 126955 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || ||||| | ||| | || |||| |||||| |||||| || ||| | | Sbjct 126956 GCGTGCTGCTTGATGTAGCCGATACGCAGGTTGGGGTGCTTCTCGACCTTGCC----GAC 127011 Query 225098 GGTTGTG----CCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGG 225153 ||| | | ||||||| || || | ||||||||| || | |||||| ||||| ||||| Sbjct 127012 GGTGGGGATGACCTCGCCCGTAAGCATCTTGATGAGGGTCGACTTGCCGGCACCGTTGGG 127071 Query 225154 GCCAATCACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGA-----AG 225208 ||| || | | | | ||||| |||| | ||| || |||| | || || Sbjct 127072 GCCGATGATGGCCACGCGGGACGACAGACTGAGCTGGCAGGAGACGT--CCGACAGCGAG 127129 Query 225209 ATCTCAGGGCCAGTTTGGTAAG----CAAAGGCCACGCCACGCAGCTTCATGATGGCACG 225264 || || | | |||| | | ||| | || || || | ||||||||||| Sbjct 127130 GGCTTGGGAGCCTTGGGGTACGTGTACGAAGCGCCCGACATGCGG----ATGATGGCACG 127185 Query 225265 GTCCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGC 225324 || || | |||||| ||||| ||||| |||||||| ||| || || Sbjct 127186 CGTCTGCGACTTGATACCCGTCAGGATGCCGGGAGGGGGGAACTTGAACTGGGCGTTGGC 127245 Query 225325 GTCCTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTT 225384 | |||| ||||| |||||||| || |||| || |||||||| Sbjct 127246 CGCAGACAGGGTATAGTAGCTCTTGGCCTCGGGGCGGAGCTCCACAAAGTTGGACAGGTT 127305 Query 225385 TCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGC 225444 || || | ||||| ||| |||||| || ||| ||| ||| Sbjct 127306 ACCCTTGTAAGAGGCAAGCTTCTTGTTGGCCTCGTAGTGGTAAATGTCCGTCGTCACGTT 127365 Query 225445 GTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGAC--GACACGTTCGTCAGGCCCTTG 225502 ||| |||||||| |||||||||||||| || | ||| | | || || | |||| Sbjct 127366 GTCCAGGAAGCCGGAGTCGTGGGACACGATCA--GACTGGTGATGTCGGTGTGCGACTTG 127423 Query 225503 AGGTGCGTGAT-GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAG 225561 |||| | || | ||||| || |||||| || |||| |||||| ||||| |||||||| Sbjct 127424 AGGTAC-TGCTCCAGCCAAGCAACGTTGGCAACATCCAGGTGGTTGGTAGGCTCGTCCAG 127482 Query 225562 AAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCC 225621 || |||| |||||| ||| ||||| || | |||| ||||||||| ||||| || Sbjct 127483 CAGGAGGACGTCAGCGCGCTGGAGCATGGCACGGGCCAGAGCCAGCTTCATCTTCCATCC 127542 Query 225622 CCCGGACAGGGAGCCGA 225638 ||||| |||||||||| Sbjct 127543 ACCGGAGAGGGAGCCGA 127559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921601444610680