Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1461 107 4e-18 >seq1461 Length=46181 Score = 107 bits (118), Expect = 4e-18 Identities = 313/473 (66%), Gaps = 12/473 (3%) Strand=Plus/Plus Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCG-GGAGTTT 243347 ||||| ||||||| || |||| | ||| || ||||| || | ||| | |||| | Sbjct 33081 TTTGCCCAGCGTCTGGTTGCCTTTGCCGCCGTCGAGGGTAT-CT-TCTTCAGCGGAGCCT 33138 Query 243348 CTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACG 243406 ||| ||||||| ||||| ||| ||| ||||||| || || | || |||| Sbjct 33139 TTGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTGACCTTCTCCAACG 33198 Query 243407 AGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGC 243466 || ||||| || |||||||| || ||| | |||| || || | || | | Sbjct 33199 AGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTCGCCTGCCTGCTGCACTCTCACC 33258 Query 243467 TCCAGAACAA-GCTACCATTCGAAACGGTCAA--ACAA-ATCATCACAGAAGCAGTTGAA 243522 || ||||| |||| || | ||||| || | |||||||| || || || Sbjct 33259 TCAAGAACCGCGCTAGCAAGCA----GGTCATCTACGACATCATCACCGATGCCGTCTCC 33314 Query 243523 AACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAA 243582 | || ||||| ||| | ||||||| | || ||| || | ||||||||| | Sbjct 33315 ATTGAGAAGGAGTTCCTCACCGACGCTCTGCCCTGCGCCCTGCTCGGCATGAACGCCACC 33374 Query 243583 CTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAG 243642 |||||| |||||||| || || || |||||||| | | | || || || | || Sbjct 33375 CTCATGCAGCAGTACATTGAGTTTGTCGCCGACCGTCTCCTGGTTGCCCTCGGCAACGAC 33434 Query 243643 AAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAA 243702 || || |||||||| | |||||||| | ||| |||||| ||| || || || || Sbjct 33435 AAGGTCTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGAAAG 33494 Query 243703 ACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATGAA 243755 || ||||||||||| |||||||| |||| || || ||||||| ||||| Sbjct 33495 ACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCTGGTGTCATGAA 33547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102854296347650