Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq857 199 5e-46 seq1461 167 3e-36 >seq857 Length=1029652 Score = 199 bits (220), Expect = 5e-46 Identities = 1044/1646 (63%), Gaps = 33/1646 (2%) Strand=Plus/Plus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 || ||||||||||| ||||||||||| ||| |||||||| | | ||||| | Sbjct 768085 CGCAGGTAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGCATGCTCGTG 768144 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | ||| | || ||| | |||| || ||| | || || || ||||| ||| Sbjct 768145 ATCTTACCCATAGTAGGATCCTTCATGTGGATGTTGAGCGACTGCGACTGGTCGATAAAG 768204 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 113773 || || || || ||||| | |||| ||| || | || |||||||| || Sbjct 768205 GCACCGCGGTCGGCAGCCATCTG---CACAACCTGGCGCTGGGAAATCTCCCACACCGTC 768261 Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833 |||| || ||| | ||| || ||||| | ||| || ||||| || || | | | Sbjct 768262 TTGTACAGAGCCTTGACATCGTCGGGGATGTTGGGGATGTTCTGGATAGAACCGCTCTCG 768321 Query 113834 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 113893 | ||| | | |||||| | | ||||| || || | || || |||| | Sbjct 768322 GCAATGATGCGGTTCTTCATCGCGTCCGACCACAGGCCCAGCTCGACCAGGTCCTTGAGC 768381 Query 113894 AGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 113953 || |||||||| |||||||| || ||| || | | ||||| |||| | Sbjct 768382 AGCCAGGGGTTGACAACCTGGAACTCACCAGCCAGGACACGGCGCGAGTAGATGTTGGAC 768441 Query 113954 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATG 114013 ||||| ||||| |||||||| ||||| |||| ||| || | ||| ||| ||||||||| Sbjct 768442 GTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCCGTGGGCATG 768501 Query 114014 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCC 114073 || || | ||| || ||| || || | ||| | | | |||||||| | |||| Sbjct 768502 GGGGCGACGAGCAGAGAGTTGCGCGTGCCGTGCTCCTTGACCTGCTCCTTGAGCGAGTCC 768561 Query 114074 CAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAG 114133 || || | | | | || | | |||||| || |||||||||||||| | |||| Sbjct 768562 CACTCCCACAGGTCCGAGGGCTTGACATCCCACATGTCGAACTGGAGGATACCCTTGGAG 768621 Query 114134 GCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCC 114193 || || || || || | |||||| || ||||| ||| |||| || | | || | Sbjct 768622 GCGGGGGAGCCGGGGAACGACTCGTAGGGACCCTCCTCCTTGGCCAGCTC--AAC-CGAC 768678 Query 114194 TC---GAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGCCTC 114249 || | ||| ||||| || || |||||||| || | |||| || | ||||| Sbjct 768679 TCCGTCACGGCGGCGTGGTAGATGGTCTCAAAGATCTGGAGGTTCAGCTGGC-GAGCCTC 768737 Query 114250 GTCGGAATCAAACGCGAGTCGGCACA-AAATAAATACATCCGCGAGACCTTGGACACCGA 114308 | || ||||| | | | ||| | | || | || |||||||| |||| ||| | Sbjct 768738 GGGCGACTCAAA-GGGCATGCGCAGAGCCAGGAAGGCGTCGGCGAGACCCTGGATACCCA 768796 Query 114309 GGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCC 114368 |||| || ||||| || | ||| || || ||||| || ||||| || | || Sbjct 768797 GGCCGATGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTTGACGGGGTAGTAGTTGA 768856 Query 114369 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 114428 || || | ||| || || || | ||| || || | || || ||||| | | Sbjct 768857 CGTCAATGATCCTGTTGAGGTTGCGGACGACGACACGCGTCACCTCGTGCAGCTTGTTGA 768916 Query 114429 AATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTAC 114488 | || | | | |||| | | |||| || || ||||| | || ||||| || | Sbjct 768917 AGTCGTAGCGGGCGTTCTCGTAGTCGACAAACGACGGCAGGGCCAGAGAGGCCAGGTTGC 768976 Query 114489 ACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCT 114548 | || | ||| || | | |||||| || || || || || | || || || Sbjct 768977 AGACGGCAACCTCGTCGGGAGCGCAGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTGC 769036 Query 114549 TAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGT 114608 ||||| |||| |||||| || || ||| ||| |||||||| |||||| Sbjct 769037 GGATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGTGGTCCTTGTAGAGCATGA 769096 Query 114609 ATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGC 114667 | || | || ||||| || |||| || ||| || | | ||||| | || | || | Sbjct 769097 AGGGGTTACCAGTCTCGGTCTGGGCCTCGAGGATCGAGTACCAGAGCTTCTG-AGCGCGG 769155 Query 114668 ACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCA 114727 | || | | | || |||||| ||||||||| ||| ||||| |||||||| ||| Sbjct 769156 ATCGTCTTGCGGCCGCGGCCCTCCCTCTCGTACTTCTCGTACAGGGCCTCAAACTCGTCA 769215 Query 114728 CCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCC 114787 || | | || | ||| || || || | ||||| | ||| | ||| | ||| | Sbjct 769216 CCGTGGACGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTC 769275 Query 114788 TCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAG 114847 | ||| |||||||||||||||||||| || |||||||| || ||| || || ||| Sbjct 769276 TTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAACAGGTCGCGAGCA 769335 Query 114848 CGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGC 114907 || | || || | || || || || | || | || || | || || |||||| Sbjct 769336 CGGACCTCCTCCTTTCCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGACGTCGGCGTGC 769395 Query 114908 CACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTACGACGACCAGCCTGGTTTACA 114961 || || || ||||| | || | || | ||| | | ||| |||||| || Sbjct 769396 CAAGGCTCAAGGTAGATGCAGAAAGCACCGGGGCGCTT--GTTG-CCACCCTGGTCGACG 769452 Query 114962 TACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTT 115021 || | || ||| || | || || ||||| || ||||| || | || || || Sbjct 769453 TAGCGGGCAGTGTTGTTGTAGACACGGAGCATGGGGATGATGCCGTTGGAGGTACCGTTG 769512 Query 115022 GTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCC 115079 || || || || ||| | | |||| | || ||| || | |||||| || | Sbjct 769513 GTACCGGCAATGTAGGAGCC--AGTGGCACGGATGCAGTGGGCGTTGAGACCAATGCCAC 769570 Query 115080 CTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGT 115139 | ||| ||| ||||| || || | |||| || ||||||| ||||| || || Sbjct 769571 CGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCGTCAATGCTGT 769630 Query 115140 CACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTG 115198 || |||| | ||| |||||||| |||| || ||||| || |||||||||||| Sbjct 769631 CATCCTTCATGTCGACGAGGAAGCACGAAGACAGCTG-GGCCTGGGGGGTACCAGCGTTG 769689 Query 115199 AAGAGGGTTGGTGTCGCGTGGATGAA 115224 |||||||| || | |||||| |||| Sbjct 769690 AAGAGGGTGGGCGAGGCGTGGGTGAA 769715 >seq1461 Length=46181 Score = 167 bits (184), Expect = 3e-36 Identities = 536/824 (65%), Gaps = 37/824 (4%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| ||||| ||||||||||||||||| ||||| || ||| | ||| |||||||| Sbjct 33527 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCACCCAGGGAGATGTTCTCCAT 33468 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGC-ACCCCAATCTGTTTGAG 125871 || || || ||||| | ||||| | | | |||| | | ||| | || Sbjct 33467 GAAGTCGAAGGGGTTGGTCGAGTTGTAGACCTTGTCGTTGCCGAGGGCAACC------AG 33414 Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931 |||||| || | ||| |||||||||||| ||| | |||||| |||| || Sbjct 33413 GAGACGGTCGGCGACAAACTCAATGTACTGCTGCATGAGGGTGGCGTTCATGCCGAGCAG 33354 Query 125932 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGAT 125991 | || || || ||||| || |||| |||||||||| ||||| || | ||| Sbjct 33353 GGCGCAGGGCAGAGCGTCGGTGAGGAACTCCTTCTCAATGGAGACGGCATCGGTGATGAT 33294 Query 125992 GGCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGA----AGAGTTCCAC-- 126045 | ||| ||| || | | | |||| |||||| ||||| | | Sbjct 33293 GTCGTAGATGA--------CCTGCTTGCTAGCGCGGT-TCTTGAGGTGAGAGTGCAGCAG 33243 Query 126046 ---GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAG 126102 ||| || || |||||||||||||||||| |||||||| || || |||||| ||| Sbjct 33242 GCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAG 33183 Query 126103 TCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAA 126162 || ||||| ||||| |||||||| | |||||| || | | ||| | || |||||| Sbjct 33182 ACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCTCCGCTGAAGAA 33123 Query 126163 GATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GT 126221 ||| ||||| || || || |||| ||||||| ||||||| | | | | |||| | Sbjct 33122 GATACCCTCGACGGCGGCAAAGGCAACCAGACGCTGGGCAAAGGTG-GAGTCCTTGTCCT 33064 Query 126222 CAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTT 126281 | |||| | || ||||| | ||||| || ||| || |||| ||||| || || | Sbjct 33063 GGATCCACCTGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGT 33004 Query 126282 CAAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATG 126341 ||||| | | | | || |||||||| | || ||||| || || | Sbjct 33003 TGAAGAGGTAGGCGCGCTGGGCGGTCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGG 32944 Query 126342 TTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTT 126400 | ||| ||||| | | ||| || | ||| | ||||||| |||| || ||| Sbjct 32943 TCTCGGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGG 32885 Query 126401 ATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 126460 ||||| ||||| || ||| | | |||||| ||||| ||||| || | Sbjct 32884 ATCTGGACCTCGCCGCTGAAACGCTCGACAAGGTTCTCATTGACAATGCCATCAGAGGCG 32825 Query 126461 GCAAAAAACGCCAGGATAT---ACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTC 126517 || || || || ||||| | | | | ||| |||| |||| | | | || | ||| Sbjct 32824 GCGAAGAAGGCAAGGATGTGGGAGATGAAGAACTTCTCGTCATCGTTGATGCGGTTGTTC 32765 Query 126518 CAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||||||| || ||||| || || || | |||||| || ||||| Sbjct 32764 CAGTCGTGGAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCA 32721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597340017672520