Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1774 113 5e-20 seq805 87.8 2e-12 >seq1774 Length=381457 Score = 113 bits (124), Expect = 5e-20 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||| || || || | |||||| || || ||||||||||| || | Sbjct 142342 ACCACCGCGCAGACGAAGGACAAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGA 142283 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || || |||||||| ||||| | || || ||||||||||| || || Sbjct 142282 CAGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 142223 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCC 64393 ||| || || || || || || || ||| || || | |||| ||| || || Sbjct 142222 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATAGTAT--CCGACGACTCG 142165 Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || | || | ||||||||||||||| || || ||||| || ||||| Sbjct 142164 ACCTCGAGCGTGATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 142115 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || | || ||||| | || |||||||||||||| Sbjct 142083 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCA 142024 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || ||||||||||| || ||||| || || || || || || || ||| Sbjct 142023 GCAAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 141964 Query 64367 ACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGGTCAAAG 64424 || || | || | ||| || || || || | || | |||||||||||| | | Sbjct 141963 ACGTTGTCGATGGTGT--CCGACGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGG 141906 Query 64425 TTTTTACGAAAATTTGCAT 64443 | || || || || ||||| Sbjct 141905 TCTTGACAAAGATCTGCAT 141887 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || |||||||| || | | |||||| |||| || |||||||| || ||| | Sbjct 142533 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAG 142474 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || ||||||||||| ||||| || || || || || || || || ||| || Sbjct 142473 ATAAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTG 142414 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || || | | ||||| || | ||| | ||||| || |||| || || ||| Sbjct 142413 TCAATAGTGTCGCTAGATTCCACCTCGAGAGTAATCGTCTTTCCCGTCAGGGTCTTGACG 142354 Query 64433 AAAATTTGCAT 64443 ||||| ||||| Sbjct 142353 AAAATCTGCAT 142343 Score = 86.0 bits (94), Expect = 6e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || |||||||| || | || || || |||| || ||||||||||| ||| | Sbjct 141849 TCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCAAAG 141790 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 ||||| ||||||||||| |||||||| || || || || || || || ||| ||| Sbjct 141789 ATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTG 141730 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 || | || || || || || || | || | |||||||||||| Sbjct 141729 TCGATGGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 141683 >seq805 Length=824856 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | |||||| |||| ||||||||||| ||| Sbjct 371870 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTTCCG 371811 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || ||||||||||| || || || || || || || || || || ||| Sbjct 371810 GCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 371751 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || || || || || | || | ||||||||| |||| || Sbjct 371750 ACATTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTC 371691 Query 64427 TTTACGAA 64434 || ||||| Sbjct 371690 TTCACGAA 371683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499633439326360