Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1461 147 2e-30 seq1774 120 3e-22 seq1475 111 1e-19 seq805 100 3e-16 >seq1461 Length=46181 Score = 147 bits (162), Expect = 2e-30 Identities = 349/524 (67%), Gaps = 15/524 (3%) Strand=Plus/Plus Query 47061 GAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAA 47120 |||| ||| |||||| | |||| |||||||| |||||||| | || || | || | Sbjct 33012 GAGACCATCCCCTGCATCCGCAAGAAGGCCGACTGGGCCATCAGGTGGATCCAGGACAAG 33071 Query 47121 AACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCG 47180 || ||| | ||| | ||| || | || || ||| ||||||||| |||||||| Sbjct 33072 GACTCCACCTTTGCCCAGCGTCTGGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGC 33131 Query 47181 GGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTT 47240 || |||||| | || || | | || | || | |||||||| || || || Sbjct 33132 GGAGCCTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTGACCTTC 33191 Query 47241 AGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCT-CT--AC 47297 ||||||||| |||||| | ||||| || || |||||| |||| ||||| || || || Sbjct 33192 TCCAACGAGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTCGCCTGCCTGCTGCAC 33251 Query 47298 TA-CAACACTAGAGTCGATCAA--AAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCC 47354 | || | | ||| || | | ||| || | | | |||||| | || Sbjct 33252 TCTCACCTCAAGAACCGCGCTAGCAAGCAGGTCAT---------CTACGACATCATCACC 33302 Query 47355 GAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGA 47414 || |||||| ||||||||| |||||| || |||| ||||||||| | | | || Sbjct 33303 GATGCCGTCTCCATTGAGAAGGAGTTCCTCACCGACGCTCTGCCCTGCGCCCTGCTCGGC 33362 Query 47415 ATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAG 47474 |||||||| | ||| ||||||| || |||||||||||||| || || ||| Sbjct 33363 ATGAACGCCACCCTCATGCAGCAGTACATTGAGTTTGTCGCCGACCGTCTCCTGGTTGCC 33422 Query 47475 CTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCG 47534 || | |||| | ||| || | || || ||||| || ||| | ||||| || Sbjct 33423 CTCGGCAACGACAAGGTCTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCTCC 33482 Query 47535 CTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 || | || ||||||||||| ||||||||||| || || || || Sbjct 33483 CTGGGTGGAAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 33526 >seq1774 Length=381457 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | || | || | ||| ||||| || ||||| ||||| || | Sbjct 142341 CCACCGCGCAGACGAAGGACAAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAC 142282 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||| ||| |||||| |||||||| || || || Sbjct 142281 AGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 142222 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| || ||||| |||| || | || |||| |||||| Sbjct 142221 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG-TCAATAGTATCCGACGACTCGAC 142163 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || |||||||||| || || || || |||||||| Sbjct 142162 CTCGAGCGTGATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 142115 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | ||||| ||| || ||||| || ||| Sbjct 142083 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCA 142024 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | |||| |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 142023 GCAAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 141964 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||||| ||| || || | ||| | || |||||||| || || Sbjct 141963 ACGTTG-TCGATGGTGTCCGACGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGT 141905 Query 127096 TTTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 141904 CTTGACAAAGATCTGCAT 141887 Score = 98.7 bits (108), Expect = 9e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| || || |||||| || || ||||| || ||||| | Sbjct 142534 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAA 142475 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 ||| | |||||||| || ||||| ||||||||||||||| || ||| ||||| ||| Sbjct 142474 GATAAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTT 142415 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 || | | ||||| || || || |||| || | ||| || || ||||| || || | Sbjct 142414 GT-CAATAGTGTCGCTAGATTCCACCTCGAGAGTAATCGTCTTTCCCGTCAGGGTCTTGA 142356 Query 127101 CAAAAATCTGCAT 127113 | ||||||||||| Sbjct 142355 CGAAAATCTGCAT 142343 >seq1475 Length=277423 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| |||| || ||||| ||| || ||||| || ||| Sbjct 220624 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCAAGCTGCTTGCCA 220565 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| |||||||| || || || || |||||||||||| ||| || |||| Sbjct 220564 GCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 220505 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | | ||| || |||| ||| | || || || || || || Sbjct 220504 ACGTTG-TCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTCCCCGTAAGGGT 220446 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 220445 CTTGACGAAGATCTGCAT 220428 >seq805 Length=824856 Score = 100 bits (110), Expect = 3e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| || ||||| || || ||||| ||||| Sbjct 371870 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTTCCG 371811 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 371810 GCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 371751 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||||| |||||| |||| ||| | || ||||| ||||| || Sbjct 371750 ACATTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTC 371691 Query 127097 TTTACAAA 127104 || || || Sbjct 371690 TTCACGAA 371683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475489988300560