Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq857 196 6e-45 seq1461 176 6e-39 >seq857 Length=1029652 Score = 196 bits (216), Expect = 6e-45 Identities = 1045/1650 (63%), Gaps = 41/1650 (2%) Strand=Plus/Plus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || ||||||||||| ||||||||||| ||| |||||||| | | ||||| | Sbjct 768085 CGCAGGTAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGCATGCTCGTG 768144 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | ||| | || ||| | |||| || ||| | || || || ||||| ||| Sbjct 768145 ATCTTACCCATAGTAGGATCCTTCATGTGGATGTTGAGCGACTGCGACTGGTCGATAAAG 768204 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 115734 || || || || ||||| | |||| ||| || | || |||||||| || Sbjct 768205 GCACCGCGGTCGGCAGCCATCTG---CACAACCTGGCGCTGGGAAATCTCCCACACCGTC 768261 Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794 |||| || ||| | ||| || ||||| | ||| || |||||||| || | | Sbjct 768262 TTGTACAGAGCCTTGACATCGTCGGGGATGTTGGGGATGTTCTGGATAGAACCGCT---C 768318 Query 115795 TTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCC 115851 | | | |||| | | |||||| | | ||||| || || | || || |||| Sbjct 768319 TCGGCAATGATGCGGTTCTTCATCGCGTCCGACCACAGGCCCAGCTCGACCAGGTCCTTG 768378 Query 115852 A----CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGAT 115907 | | ||| | |||||||| |||||||| || ||| || | | ||||| Sbjct 768379 AGCAGCCAGGGG----TTGACAACCTGGAACTCACCAGCCAGGACACGGCGCGAGTAGAT 768434 Query 115908 GTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGT 115967 ||||| |||||| ||||| |||||||| ||||| |||| ||| || | ||| ||| || Sbjct 768435 GTTGGACGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCCGT 768494 Query 115968 GGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAG 116027 ||||||||| || | ||| || |||||| || | || | | | |||||||| Sbjct 768495 GGGCATGGGGGCGACGAGCAGAGAGTTGCGCGTGCCGTGCTCCTTGACCTGCTCCTTGAG 768554 Query 116028 GGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACC 116087 | |||||| || | | | | || | |||||||| || |||||||||||||| Sbjct 768555 CGAGTCCCACTCCCACAGGTCCGAGGGCTTGACATCCCACATGTCGAACTGGAGGATACC 768614 Query 116088 TTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGA 116147 | ||| || || || || || | ||| || || ||||| ||| |||| || | Sbjct 768615 CTTGGAGGCGGGGGAGCCGGGGAACGACTCGTAGGGACCCTCCTCCTTGGCCAGCTC--A 768672 Query 116148 GCTCGCCTC---GAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCT 116203 | || ||| | ||| ||||| || || |||||||| || | |||| || | Sbjct 768673 AC-CGACTCCGTCACGGCGGCGTGGTAGATGGTCTCAAAGATCTGGAGGTTCAGCTGGC- 768730 Query 116204 TGGCCTCGTCGGAATCAAACGCGAGACGGCACA-AAATAAATACATCCGCGAGACCTTGG 116262 |||||| || ||||| | | | ||| | | || | || |||||||| ||| Sbjct 768731 GAGCCTCGGGCGACTCAAAGGGCATGC-GCAGAGCCAGGAAGGCGTCGGCGAGACCCTGG 768789 Query 116263 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAA 116322 | ||| ||||| || ||||| || | ||| || || ||||| || ||||| || Sbjct 768790 ATACCCAGGCCGATGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTTGACGGGGTAG 768849 Query 116323 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 116382 | || || || | ||| || || || | ||| || || | || || ||| Sbjct 768850 TAGTTGACGTCAATGATCCTGTTGAGGTTGCGGACGACGACACGCGTCACCTCGTGCAGC 768909 Query 116383 TTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCC 116442 || | | | || | | | |||| | | |||| || || ||||| | || ||| Sbjct 768910 TTGTTGAAGTCGTAGCGGGCGTTCTCGTAGTCGACAAACGACGGCAGGGCCAGAGAGGCC 768969 Query 116443 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTT 116502 || || || || | ||| || | | |||||| || || || || || | || Sbjct 768970 AGGTTGCAGACGGCAACCTCGTCGGGAGCGCAGTACTCAATGATCTCAGTGCAGAGGTTG 769029 Query 116503 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAG 116562 || || ||||| |||| |||||| || || ||| ||| ||||||||| Sbjct 769030 GAGCTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGTGGTCCTTGTAG 769089 Query 116563 AGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGC 116621 ||||| | || | || ||||| || |||| || ||| || | | ||| | | || | Sbjct 769090 AGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGGATCGAGTACCAGAGCTTCTG- 769148 Query 116622 GGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAA 116681 || | | || | | | || |||||| ||||||||| ||| ||||||||||| Sbjct 769149 AGCGCGGATCGTCTTGCGGCCGCGGCCCTCCCTCTCGTACTTCTCGTACAGGGCCTCAAA 769208 Query 116682 CTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTG 116741 ||| ||||| | || | ||| || || || | || || | ||| | ||| | Sbjct 769209 CTCGTCACCGTGGACGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTC 769268 Query 116742 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATC 116801 ||| || ||| || ||||||||||||||||| || |||||||| ||| ||| || || Sbjct 769269 ACCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAACAGGTC 769328 Query 116802 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 116861 ||| || | || || | || || || || | || | || || | || || Sbjct 769329 GCGAGCACGGACCTCCTCCTTTCCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGACGTC 769388 Query 116862 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTT 116918 |||||||| || || ||||| | || | || ||| ||| |||||| Sbjct 769389 GGCGTGCCAAGGCTCAAGGTAGATGCAGAAAGCACCGGGGCGCTTGTTGCCACCCTGGTC 769448 Query 116919 TACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCC 116978 || || | || || ||| | || || ||||| || ||||| || | || || Sbjct 769449 GACGTAGCGGGCAGTGTTGTTGTAGACACGGAGCATGGGGATGATGCCGTTGGAGGTACC 769508 Query 116979 ATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATA 117036 || || || || || ||| | |||| | || |||| || | |||||| Sbjct 769509 GTTGGTACCGGCAATGTAGGAGCC--AGTGGCACGGATGCAGTGGGCGTTGAGACCAATG 769566 Query 117037 CCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATC 117096 || || ||| ||| ||||| || || | |||| || ||||||| || || || Sbjct 769567 CCACCGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCGTCAATG 769626 Query 117097 GAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGC 117155 |||| |||| | ||| ||||||||| |||| || ||||| || |||||||| Sbjct 769627 CTGTCATCCTTCATGTCGACGAGGAAGCACGAAGACAGCTG-GGCCTGGGGGGTACCAGC 769685 Query 117156 GTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 |||||||||||| || | |||||| |||| Sbjct 769686 GTTGAAGAGGGTGGGCGAGGCGTGGGTGAA 769715 >seq1461 Length=46181 Score = 176 bits (194), Expect = 6e-39 Identities = 538/824 (65%), Gaps = 37/824 (4%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| || || ||||||||||||||||| ||||| ||| | ||| ||| |||||||| Sbjct 33527 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCACCCAGGGAGATGTTCTCCAT 33468 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGC-ACCCCAATCTGTTTGAG 127344 || || || ||||| | ||||| | | | |||| | | ||| | || Sbjct 33467 GAAGTCGAAGGGGTTGGTCGAGTTGTAGACCTTGTCGTTGCCGAGGGCAACC------AG 33414 Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404 |||||| || | ||| |||||||||||| ||| | |||||| |||| || Sbjct 33413 GAGACGGTCGGCGACAAACTCAATGTACTGCTGCATGAGGGTGGCGTTCATGCCGAGCAG 33354 Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464 | || || || ||||| || |||| ||||||||||| || || || | ||| Sbjct 33353 GGCGCAGGGCAGAGCGTCGGTGAGGAACTCCTTCTCAATGGAGACGGCATCGGTGATGAT 33294 Query 127465 GGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGA----AGAGTTCCACAG 127520 | ||| || ||| ||| ||| |||||| ||||| | ||| Sbjct 33293 GTCGTAGATG------ACCTGCTTGCTAGCGCGGT---TCTTGAGGTGAGAGTGCAGCAG 33243 Query 127521 -----CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAG 127575 | || || |||||||||||||||||| |||||||| || || |||||| ||| Sbjct 33242 GCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAG 33183 Query 127576 ACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAA 127635 ||| ||||| ||||| |||||||| | |||||| || | | ||| | || |||||| Sbjct 33182 ACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCTCCGCTGAAGAA 33123 Query 127636 GATCCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-AT 127694 ||| ||||| || || || |||| ||||||| |||||||| | | | | |||| | Sbjct 33122 GATACCCTCGACGGCGGCAAAGGCAACCAGACGCTGGGCAAAGGTG-GAGTCCTTGTCCT 33064 Query 127695 CAAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTT 127754 | |||| | || ||||| | ||||| || ||| || |||| ||||| || || | Sbjct 33063 GGATCCACCTGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGT 33004 Query 127755 CAAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATG 127814 ||||| | | | | || |||||||| | || ||||| || || | Sbjct 33003 TGAAGAGGTAGGCGCGCTGGGCGGTCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGG 32944 Query 127815 TTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTT 127873 | ||| ||||| | | ||| || | ||| | ||||||| |||| || ||| Sbjct 32943 TCTCGGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGG 32885 Query 127874 ATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 127933 ||||| ||||| || ||| | | |||||| ||||| ||||| || | Sbjct 32884 ATCTGGACCTCGCCGCTGAAACGCTCGACAAGGTTCTCATTGACAATGCCATCAGAGGCG 32825 Query 127934 GCAAAAAACGCCAGGATAT---ACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTC 127990 || || || || ||||| | | | | ||| |||| |||| | | | || | ||| Sbjct 32824 GCGAAGAAGGCAAGGATGTGGGAGATGAAGAACTTCTCGTCATCGTTGATGCGGTTGTTC 32765 Query 127991 CAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||||||| ||| ||||| || || || | |||||| || ||||| Sbjct 32764 CAGTCGTGGAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCA 32721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613493250380040