Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1774 134 3e-26 seq1475 125 2e-23 seq805 118 2e-21 >seq1774 Length=381457 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||||||||| |||| ||||||||| | | ||| | ||||| Sbjct 142098 AGGACGAGGTGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCC 142039 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || || || || |||||||||||||| ||| || || ||| Sbjct 142038 TCAAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 141979 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || |||| ||||| ||| Sbjct 141978 TGGATCTTGGACTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCCAGGGTGATGGTC 141919 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || ||||| || || Sbjct 141918 TTGCCGGTGAGGGTCTTGACAAAGATCTG 141890 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || ||||||||||| || | ||||||||||| || || | ||||| Sbjct 142326 AGGACAAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGACAGCGTGCGGCCATCC 142267 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||||||||| || |||||||||||||| ||| || || ||| Sbjct 142266 TCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 142207 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | || || | | || || || | |||||| ||| Sbjct 142206 TGGATCTTGGACTTGACGTTGTCAATAGTATCCGACGACTCGACCTCGAGCGTGATGGTC 142147 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || || || || || || Sbjct 142146 TTGCCGGTCAACGTCTTGACGAAGATCTG 142118 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| |||||| |||| ||||||||||| || || | || || Sbjct 142554 AGGACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCGTCC 142495 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| |||||||||||||| ||| || || || ||| Sbjct 142494 TCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 142435 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| || | ||||| | | ||| || || | || |||||| Sbjct 142434 TGAATCTTCGACTTGACGTTGTCAATAGTGTCGCTAGATTCCACCTCGAGAGTAATCGTC 142375 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || ||||| || Sbjct 142374 TTTCCCGTCAGGGTCTTGACGAAAATCTG 142346 Score = 109 bits (120), Expect = 1e-18 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| || |||||| |||| ||||||||| | | ||| | || || Sbjct 141870 AGAACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCC 141811 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || |||||||||||||||||||| ||| ||| || || ||| Sbjct 141810 TCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 141751 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| |||||| | | || || || | ||||| ||| Sbjct 141750 TGGATCTTCGACTTCACATTGTCGATGGTGTCGGAGGACTCAACCTCGAGGGTGATGGTC 141691 Query 199598 TTACCCGTGA 199607 || || |||| Sbjct 141690 TTGCCGGTGA 141681 >seq1475 Length=277423 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||||||||| |||||||| |||| ||||||||| || ||| | ||||| Sbjct 220639 AGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCC 220580 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| || |||||||||||||| || || || ||| Sbjct 220579 TCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 220520 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 220519 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 220460 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || || || || Sbjct 220459 TTCCCCGTAAGGGTCTTGACGAAGATCTG 220431 >seq805 Length=824856 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || || |||||||| |||| ||||||||| | || || | || || Sbjct 371885 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 371826 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||| ||||| ||||||||||||||||| || || || ||| Sbjct 371825 TCAAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 371766 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || || | |||||| | | || || || | ||||| ||| Sbjct 371765 TGGATCTTGGACTTGACATTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTC 371706 Query 199598 TTACCCGTGAGAGTTTTCACAAA 199620 || ||||| || || ||||| || Sbjct 371705 TTGCCCGTCAGGGTCTTCACGAA 371683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178894124126873