Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1461 266 3e-66 seq805 120 3e-22 seq1774 118 1e-21 seq1475 113 5e-20 >seq1461 Length=46181 Score = 266 bits (294), Expect = 3e-66 Identities = 563/828 (68%), Gaps = 23/828 (3%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || ||||| ||| ||| ||| | ||| || || ||||||||| Sbjct 33511 TTCTCGAAGAAGTTGGTCTTTCCACCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTG 33452 Query 132685 GCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | ||||||| |||| |||||| || | || || || | |||||| || ||| Sbjct 33451 GTCGAGTTGTAGACCTTGTCGTTGCCGA---GGGCAACCAGGAGACGGTCGGCGACAAAC 33395 Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTT 132799 || ||||| ||| |||| | | || | | | || ||||| |||| ||||| || | Sbjct 33394 TCAATGTACTGCTGCATGAGGGTGGCGTTCATG-CCGAGCAGGGCGCAG-GGCAGAGCGT 33337 Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859 ||||||| || | ||| |||| ||| || ||||||| ||| || | | | | Sbjct 33336 CGGTGAGGAACTCCTTCTCAATGGAGACGGCATCGGTGATGATGTCGTAGATGACCTGCT 33277 Query 132860 CGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919 ||| | || | | | || | || || ||| || |||||| || | |||| Sbjct 33276 TGCTAGCGCGGTTCTTGAGGTGAGAGTGCAGCAGGCAGGCGAAGTCGGTGTGGAGACCCT 33217 Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979 |||| | || ||||| |||||| ||| |||| |||||||| || || || || |||| Sbjct 33216 CGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATCAGACCACGCTTCTTGA 33157 Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039 |||| || |||| || || || ||||||| ||||||||||| || || || | Sbjct 33156 GCCAGAAGATGGAAGCAAAGGCTCCGCTGAAGAAGATACCCTCGACGGCGGCAAAGGCAA 33097 Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTG--CTGGCGATCCAGCGCAGCGCCCATTCGGC 133097 |||| |||| | | || |||| || ||| |||| ||||| | | ||||| ||||| Sbjct 33096 CCAGACGCTGGGCAAAGGTGGAGTCCTTGTCCTGG--ATCCACCTGATGGCCCAGTCGGC 33039 Query 133098 CTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGA 133157 ||| | || ||| || || || || |||||||| || | | || | || | Sbjct 33038 CTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAG--GTAGGCGCGCTGG-GC 32982 Query 133158 GGAACGC---ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCAT 133214 || | | ||||||||| ||||| || || | || ||||| | ||||||||| Sbjct 32981 GGTCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTCTCGGAGTGGATGTTCTCCAT 32922 Query 133215 GGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACG 133274 ||| || || ||||| ||||| || |||||| | ||| || || |||||| Sbjct 32921 CATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATCTGGACCTCGCCGCTGAAACG 32862 Query 133275 CTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTT 133334 |||||| || || || ||||| ||||| || ||||||||| ||||| || | ||| Sbjct 32861 CTCGACAAGGTTCTCATTGACAATGCCATCAGAGGCGGCGAAGAAGGCAAGGATGTGGGA 32802 Query 133335 GATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAG 133391 |||||| ||||| ||||| | ||| | ||||||| | |||||||||||| Sbjct 32801 GATGAAGAACTTCTCGTCATCGTTGATGCGGTTGTTCCAGTCGTGGAGGTCCTTGGACAG 32742 Query 133392 GTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||| | ||||||| ||||||| || || |||||||| || |||||||| Sbjct 32741 GTCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 32694 >seq805 Length=824856 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| |||| |||||| || | |||| | | Sbjct 371683 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATT 371742 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| || ||| | ||||| ||||| || Sbjct 371743 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTG 371802 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || || || ||||| || |||| |||||||| ||||||||||||||| ||| Sbjct 371803 ATCTTTGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAG 371862 Query 38433 GAAGCGACGCTGCATTTGGTGCTGCG 38458 || | || ||||| |||| || || Sbjct 371863 GAGTCCACCCTGCACCTGGTCCTCCG 371888 >seq1774 Length=381457 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| ||||||||| | || || ||| | | Sbjct 141887 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCGTCG 141946 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || |||| ||||| ||||| |||||| | ||||| Sbjct 141947 GACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 142005 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| || ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 142006 GCAGCGCCTGATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTCTCCGACTACAA 142065 Query 38423 CATCCAAAAGGAAGCGACGCTGCA 38446 |||||| ||||| |||| || || Sbjct 142066 CATCCAGAAGGAGTCGACACTCCA 142089 Score = 109 bits (120), Expect = 5e-19 Identities = 142/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325 |||| ||||| ||||||||| |||| || ||| || |||||| | | | | | || Sbjct 141681 TCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACCATCGACAATGTGAAGT 141740 Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || |||| ||||| ||||| ||||| | ||||| ||||| ||||| | || |||| Sbjct 141741 CGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTCATCTTTGCTGGCA 141800 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGCTG 38444 | ||||| || |||| || || ||| ||||||||||||||| ||||| ||| || || Sbjct 141801 AGCAGCTCGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAAGGAGAGC-ACCCTC 141859 Query 38445 CATTTGGTGCTGCG 38458 || |||| || || Sbjct 141860 CACCTGGTTCTTCG 141873 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||| | || ||||| |||||||| |||| |||||| | | Sbjct 142115 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACCATCACGCTCGAGGTCGAGTCGTCG 142174 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | |||| | || || |||| ||||| ||||| |||||| | ||||| Sbjct 142175 GATACTATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 142233 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| || || ||||| || || | ||||| || |||||||| Sbjct 142234 GCAGCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACGCTGTCTGACTACAA 142293 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || ||||| |||||||||| | || || ||| || | || || Sbjct 142294 CATTCAGAAGGAGTCGACGCTGCACCTTGTCCTTCGTCTGCGCGGTGG 142341 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || ||||| || || || || |||| || || | | | Sbjct 142343 ATGCAGATTTTCGTCAAGACCCTGACGGGAAAGACGATTACTCTCGAGGTGGAATCTAGC 142402 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || || || | ||||| ||||| || || | ||||| Sbjct 142403 GACACTATTGACAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCA 142461 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || || || ||||| || |||| |||||||| |||||||| Sbjct 142462 GCAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTGTCTGACTACAA 142521 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| ||| || || || |||| || ||| | | ||||||| Sbjct 142522 CATCCAGAAGGAGAGC-ACTCTTCACCTGGTCCTCCGTCTCCGTGGCGGCC 142571 >seq1475 Length=277423 Score = 113 bits (124), Expect = 5e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || ||||| || || |||||| |||| || ||| | Sbjct 220425 AAGATGCAGATCTTCGTCAAGACCCTTACGGGGAAGACTATCACCCTCGAGGTGGAGTCT 220484 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | || || |||| ||||| ||||| || ||| | || Sbjct 220485 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGA 220543 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| || || | || ||||| ||||| || || | ||||| || | |||||| Sbjct 220544 CCAGCAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTGAGCGACTA 220603 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| | || || || |||| || || Sbjct 220604 CAACATCCAGAAGGAGTCCACTCTCCACCTGGTCCTCCG 220642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500161427320960