Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 241 2e-58 seq805 167 3e-36 seq1774 84.2 3e-11 >seq1 Length=302712 Score = 241 bits (266), Expect = 2e-58 Identities = 478/705 (68%), Gaps = 12/705 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||| ||| || || || ||||| | ||||| || |||||||| Sbjct 22813 TCGAAGTCCTCACCACCCAGGTGAGTGTCACCAGCGGTAGACTTGACCTCGAAGATACCC 22754 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | |||||||| || |||||||||||||| || || || || ||| Sbjct 22753 TCCTCGATGGTGAGGAGAGAAACATCGAAGGTACCACCACCCAGATCGAAGATCAGGACG 22694 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | || | ||||| ||||||||||| ||||| || || || || || || Sbjct 22693 TTGCGCTCACCCTCGATCTTCTTGTCGAGACCGTAGGCGATGGCAGCGGCGGTGGGCTCG 22634 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || ||| || || ||||| | || || || || || || || Sbjct 22633 TTGATGATACGGAGGACGTTGAGACCGGCAATGAGACCGGCGTCCTTGGTAGCCTGACGC 22574 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| |||||||| ||||| || || || |||| ||||| | |||||| Sbjct 22573 TGGGAGTCGTTGAAGTAGGCGGGGACAGTGACAACGGCGTTGGTGACGGTGCCACCGAGG 22514 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || ||| | || ||| ||||| || ||||| || || ||||| || | | Sbjct 22513 TAGGCCTCAGCGGTCTCACGCATCTTGGTGAGGACCATGGAGGAGATCTCCTCGGGGGTG 22454 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---G 7873 || || || || || || || || || | || ||||| || || |||| | Sbjct 22453 AAGGTCTTGGTCTCGCCCTTGAACTCGACCTGGATGATGGGCTT----GC--CACCCTTG 22400 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 ||| | | | | | ||||| ||| | ||||||| ||| ||||| Sbjct 22399 TCGATGATGGAGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCGTCGCTGAACTTG 22340 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | ||||| |||||||| || || || || ||||| |||||||||||| |||||| Sbjct 22339 CGGCCGATGAGACGCTTGGCGTCGAAGACGGTGTTGGAGGGGTTCATGGCGACCTGGTTC 22280 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || || || ||||| ||||| || | | || || || ||||| | || ||||| Sbjct 22279 TTGGCGGCATCACCGATGAGACGCTC---AGTGTCGGTGAAACCGACGAAAGAAGGGGTG 22223 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 || || || || |||||||| ||||| || || ||||| | | ||| || ||| Sbjct 22222 GTGCGGTTACCCTGGTCGTTGGCAATGATGTCGCAACGGTCCTCACGGAAGATACCCACG 22163 Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATT 8158 || || ||||| || || | || ||||||| || ||| |||| Sbjct 22162 CAAGAGTACGTGGTACCCAGGTCGATACCGACGGCGGGAGCCATT 22118 >seq805 Length=824856 Score = 167 bits (184), Expect = 3e-36 Identities = 366/543 (67%), Gaps = 9/543 (2%) Strand=Plus/Minus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGA 7302 ||| ||||| || || |||||||| |||| | | | || |||||||| | | || Sbjct 762070 CAGCTCCTCGAAGCGGGCACGGGTGATGGTCATGGCGTAGTCCTCGCCGTCGAAGAGAGA 762011 Query 7303 ATCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360 ||||| ||||| | | || || || | || | || ||||| || ||||| || Sbjct 762010 GTCAATCTCAATCATGGCCTGGGCACCGCTG--GACAGGGTACGCTTGGCACGCTCGCAA 761953 Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGT 7420 || || || | ||| || || ||||| |||| || || | || ||||| || || Sbjct 761952 GCAGTGCGGAGACGGCGGAGAGCACGGGGGTCGCCAGAGAGGTCCTTCTTGCTCTTGCGG 761893 Query 7421 TTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 || || | | |||| |||| |||| | | ||||| || | |||||||| ||| Sbjct 761892 AGGAAGTCCTTCTTGCAGTGCTCGA-GGAGGTTGGTGTCGAAGTCCTGACCACCCAGGTG 761834 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || || || ||||| || ||||| |||| ||| || | ||||| | || || || Sbjct 761833 AGTGTCACCGGCGGTAGCCTTGACGGTGAAGACACCACCCTGGATGTTGAGCAGGGAGAC 761774 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT---TTGTT 7596 ||| || ||||||||||| || || | ||||| ||||| || | || ||||| Sbjct 761773 ATCGAAGGTACCACCACCAAGATCGTAGATGAGGACGTTGCGCTCCTTGTTGGACTTGTT 761714 Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 | |||||||||| ||||| || || || || || || || || ||||| ||| ||| Sbjct 761713 GGCACCGAGACCGTAGGCGATGGCGGCGGCAGTGGGCTCGTTGATGATACGGAGAACGTT 761654 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 ||||| ||||| | | || || || || || || || || ||||| |||||||| Sbjct 761653 GAGGCCGGCAATGGCACCAGCGTCCTTGGTGGCCTGACGCTGGTTGTCGTTGAAGTAGGC 761594 Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTT 7776 |||||||| | ||| || | | || ||||||||||| | | || || || || || Sbjct 761593 AGGGACCGTGATGACGGCCTTCTCAACCTTCTTACCGAGCTTGGTCTCGGCAATCTCCTT 761534 Query 7777 CAT 7779 ||| Sbjct 761533 CAT 761531 >seq1774 Length=381457 Score = 84.2 bits (92), Expect = 3e-11 Identities = 146/212 (69%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||| ||| || || || ||||| | |||| || ||| |||| Sbjct 39552 TCGAAGTCCTCACCACCCAGGTGGGTGTCACCGGCGGTGGACATGACCTCGAAGGTACCC 39611 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||||| | | || ||||| || ||||||||||||||||| | | || | Sbjct 39612 TGGTCAATGGACAGAAGGGAGACATCGAAAGTACCACCACCCAGGTCGTAGACGATGATC 39671 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | ||| ||| | |||| || |||||||| |||||||| || || || || || Sbjct 39672 TGGCGCTCGAGGTC---GGTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTGGGCTCG 39728 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668 || | ||||| || ||| || || ||||| Sbjct 39729 TTGACGATACGGAGGACGTTGAGACCGGCAAT 39760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635118358667960