Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq857 210 3e-49 seq1461 118 1e-21 >seq857 Length=1029652 Score = 210 bits (232), Expect = 3e-49 Identities = 901/1397 (64%), Gaps = 39/1397 (3%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| || || |||| ||| || || | || || ||| Sbjct 769808 CCCCAGCACATGATCATGCGTGTTGCCGTCGGCATCTGGGGTGACAACATCGAGCGTGTC 769749 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTA-TG-TTCATCCACGCAACACCAACCCTCT 111729 | ||||| ||| || ||||| | | | || |||| |||||| | || ||||||| Sbjct 769748 ATTGAGACGTACAACCTCATGTC--GAGCAAGTGCTTCACCCACGCCTCGCCCACCCTCT 769691 Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789 ||||||||||||| || |||| |||| || ||||| | | | ||||| | Sbjct 769690 TCAACGCTGGTACCCCCCAGGCCCAGCTGTCTTCGTGCTTCCTCGTCGACATGAAGGATG 769631 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 | || | || || |||| ||| |||| |||||| ||||| ||| ||| | Sbjct 769630 ACAGCATTGACGGTATCTACGACACCCTCAAGACCTGTGCCATGATCTCCAAGACGGCCG 769571 Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTAC 111907 |||| || || | || ||| || | |||| | ||| || || ||||| Sbjct 769570 GTGGCATTGGTCTCAACGCCCACTGCATCCGTGCCACT--GGCTCCTACATTGCCGGTAC 769513 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 || ||| || | || || || || ||||| || || | ||| ||| || ||||| Sbjct 769512 CAACGGTACCTCCAACGGCATCATCCCCATGCTCCGTGTCTACAACAACACTGCCCGCTA 769453 Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATC-GCAGTCTATCTTGAGCCAT 112020 || |||| | ||| ||| | | || || || ||| |||| |||||||| | Sbjct 769452 CGTCGACCAGGGTGGCAACAAGCGCCCC---GGTGCTTTCTGCA-TCTACCTTGAGCCTT 769397 Query 112021 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGC 112080 ||||||| || || | ||||||||||| | || ||||| || | ||||||| | Sbjct 769396 GGCACGCCGACGTCTTCGAGTTCCTTGACCTCCGCAAGAACCACGGAAAGGAGGAGGTCC 769337 Query 112081 GGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139 | ||| ||||| || ||| || ||||||||||| || |||||||||||| | || ||| Sbjct 769336 G-TGCTCGCGACCTGTTCCTGGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCGAG 769278 Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG 112199 ||| || | ||| | ||| | || || || || ||||| ||| |||| | | Sbjct 769277 AAGAACGGTGACTGGACCCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACGTCCAC 769218 Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GA 112257 ||||| |||||||| ||||| ||| ||||||||| || || ||| | || || Sbjct 769217 GGTGACGAGTTTGAGGCCCTGTACGAGAAGTACGAG--AGGGAGGGCCGCGGCCGCAAGA 769160 Query 112258 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 112316 || | | ||| | || | | ||| | | || ||| || | || ||||||||||||| Sbjct 769159 CGATCCGCGCT-CAGAAGCTCTGGTACTCGATCCTCGAGGCCCAGACCGAGACTGGTAAC 769101 Query 112317 CCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 112376 || | ||||| ||||| ||| | |||| ||||| || || ||||| ||||| Sbjct 769100 CCCTTCATGCTCTACAAGGACCACGCCAACCGCAAGAGCAACCAGAAGAACCTGGGTACC 769041 Query 112377 ATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 112436 ||| || ||||||||||| || || ||| | || | | || ||| || Sbjct 769040 ATCCGCAGCTCCAACCTCTGCACTGAGATCATTGAGTACTGCGCTCCCGACGAGGTTGCC 768981 Query 112437 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--AT 112494 || || ||||| || || | || || || || ||| || | || || | | | Sbjct 768980 GTCTGCAACCTGGCCTCTCTGGCCCTGCCGTCGTTTGTCGA--CTACGAGAACGCCCGCT 768923 Query 112495 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTA 112554 || | | || || ||||| || ||| ||| ||||| ||||| | | Sbjct 768922 ACGACTTCAACAAGCTGCACGAGGTGACGCGTGTCGTCGTCCGCAACCTCAACAGGATCA 768863 Query 112555 TTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 112614 |||| || | |||||||| || ||||| || || ||| | ||||| || | Sbjct 768862 TTGACGTCAACTACTACCCCGTCAAGGAGGCTCGCAACAGCAACATGCGCCACCGCCCCA 768803 Query 112615 TTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGAT 112673 | || || ||| |||| |||||||| || | ||| | || || ||| | ||||| Sbjct 768802 TCGGCCTGGGTATCCAGGGTCTCGCCGACGCCTTCCTGGCTCTG-CGCATGCCCTTTGAG 768744 Query 112674 TCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTT 112733 || ||| || | | || | || |||||||| || || |||||||| | | Sbjct 768743 TCGCCCGAGGCTCGCCAGCTGAACCTCCAGATCTTTGAGACCATCTACCACGCCGC-CGT 768685 Query 112734 GAGGCGAGTTCG--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTC 112791 || | |||| | ||| |||| ||| || ||||| || || | || || || | Sbjct 768684 GACG-GAGTCGGTTGAGCTGGCCAAGGAGGAGGGTCCCTACGAGTCGTTCCCCGGCTCCC 768626 Query 112792 CAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTAC 112850 | || || |||||| | || || || || |||||||| | || || | | | Sbjct 768625 CCGCCTC-CAAGGGTATCCTCCAGTTCGACATGTGGGATGTCAAGCCCTCGGACCTGTGG 768567 Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910 || |||||| | |||||||| | |||||||| | || || ||| ||| | | Sbjct 768566 GAGTGGGACTCGCTCAAGGAGCAGGTCAAGGAGCACGGCACGCGCAACTCTCTGCTCGTC 768507 Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970 || || ||||| || ||| ||| | || ||| |||| || || || ||||| || ||| Sbjct 768506 GCCCCCATGCCCACGGCCAGCACGTCGCAGATCCTGGGCAACAACGAGTGCTTCGAGCCC 768447 Query 112971 TACACGACGAACATCTA 112987 |||||| | |||||||| Sbjct 768446 TACACGTCCAACATCTA 768430 >seq1461 Length=46181 Score = 118 bits (130), Expect = 1e-21 Identities = 169/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 ||||| | ||||| | || | || || || | ||||| || || ||||| || | | Sbjct 32997 CTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAGAAGGCCGACTGGGCCATCAGG 33056 Query 102150 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 102208 ||| | | |||| | | | ||||||| |||| || | || ||||| || || Sbjct 33057 TGGATCCAGGACAAGGACTCCA-CCTTTGCCCAGCGTCTGGTTGCCTTTGCCGCCGTCGA 33115 Query 102209 GGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCA 102267 ||||||||||||| || |||| ||| | || | |||||||||||||| ||||| | Sbjct 33116 GGGTATCTTCTTCAGCGGAGCCTT-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTGA 33174 Query 102268 TGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||| ||||| ||||||||||||||| ||||| ||||||||||| |||||| Sbjct 33175 TGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGTCTCCAC 33227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620728285869680