Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1774 152 1e-31 seq1475 129 1e-24 seq805 122 2e-22 >seq1774 Length=381457 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||||||| ||| || || || ||||| || | || || | || || ||| Sbjct 142551 ACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCGTCCTCG 142492 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || |||||||| || || ||||| ||||| ||||| || ||||| ||| Sbjct 142491 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGA 142432 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| ||||| ||||| | |||||| || || |||| ||||||| Sbjct 142431 ATCTTCGACTTGACGTTGTCAATAGTGTCGCTAGATTCCACCTCGAGAGTAATCGTCTTT 142372 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 142371 CCCGTCAGGGTCTTGACGAAAATCTGCAT 142343 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || || ||||| || ||||| ||||| || | || || | ||||| ||| Sbjct 142323 ACAAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGACAGCGTGCGGCCATCCTCG 142264 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || |||||||| || ||||| || Sbjct 142263 AGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 142204 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| ||||| || ||||| || || || || || | ||||| Sbjct 142203 ATCTTGGACTTGACGTTGTCAATAGTATCCGACGACTCGACCTCGAGCGTGATGGTCTTG 142144 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || ||||| | ||||| Sbjct 142143 CCGGTCAACGTCTTGACGAAGATCTGCAT 142115 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| |||| ||||| | ||||| || Sbjct 142095 ACGAGGTGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCA 142036 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || || || || || || ||||| || |||||||| || ||||| || Sbjct 142035 AGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 141976 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || ||||||||||| || || || ||||| | ||||| Sbjct 141975 ATCTTGGACTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCCAGGGTGATGGTCTTG 141916 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 141915 CCGGTGAGGGTCTTGACAAAGATCTGCAT 141887 Score = 111 bits (122), Expect = 3e-19 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| ||||| || ||| ||| || || || ||||| |||| ||||| | || || || Sbjct 141868 AACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTC 141809 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || || ||||| || || || ||||| ||||||||||| || ||||| || Sbjct 141808 GAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTG 141749 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || || || |||||||| || || || || ||||| | ||||| Sbjct 141748 GATCTTCGACTTCACATTGTCGATGGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTT 141689 Query 195111 TCCTGT 195116 || || Sbjct 141688 GCCGGT 141683 >seq1475 Length=277423 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||||||||| || || || ||||| ||| ||||| | ||||| || Sbjct 220636 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCA 220577 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || ||||| || || || || || ||||| || Sbjct 220576 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 220517 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || |||||||| ||| ||||| || ||||| | ||||| Sbjct 220516 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTC 220457 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 220456 CCCGTAAGGGTCTTGACGAAGATCTGCAT 220428 >seq805 Length=824856 Score = 122 bits (134), Expect = 2e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| |||| || || | || || || Sbjct 371882 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCA 371823 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || ||||| || || ||||| || ||||| || Sbjct 371822 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 371763 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || |||||||||||||| || || || ||||| | ||||| Sbjct 371762 ATCTTGGACTTGACATTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTG 371703 Query 195112 CCTGTCAAAGTTTTTACGAA 195131 || |||| || || ||||| Sbjct 371702 CCCGTCAGGGTCTTCACGAA 371683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109455742491173