Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1199 111 1e-19 >seq1199 Length=300581 Score = 111 bits (122), Expect = 1e-19 Identities = 201/290 (69%), Gaps = 7/290 (2%) Strand=Plus/Plus Query 29685 ATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGTTCTCCAC 29744 ||| || ||||| |||| | | ||||||||| ||||| || | || | | | |||| Sbjct 272157 ATGCGGCTCGTACCCCTTGATGACGAAATCCTCAGCCTTCCAGCCATCGATGCTG-CCAC 272215 Query 29745 CCT----CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCT 29800 ||| |||| ||| || ||| ||| | || || | ||| ||||| |||| Sbjct 272216 CCTTTTCCCTGGAAATCTCCAAGTCGGGGAAGACACGCGGTTCACGCTCCAGCTGCGTCT 272275 Query 29801 TCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCT 29859 ||| | || ||||| || ||||| ||||| || || |||| | || | || | | Sbjct 272276 CCAGAGCCTCGACGTGGTCAAGGTAAACGTGCGCATCACCCATGACATGCGTCAGGCCC- 272334 Query 29860 CCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATG 29919 ||||| | || || || || || ||||||| |||||| |||| |||||| ||||| Sbjct 272335 CCCGGCACCAGGTCGCACACATGGGCAATCATGTGCGTGAGCAGAGCGTAGCTAGCGATA 272394 Query 29920 TTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969 || ||||| || || | ||||| || | |||||||||||| |||||||| Sbjct 272395 TTGAAGGGCACTCCCAAGCCCATATCGCACGACCTCTGGTACAGCTGACA 272444 Score = 105 bits (116), Expect = 5e-18 Identities = 255/381 (67%), Gaps = 10/381 (3%) Strand=Plus/Plus Query 30008 TGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGA 30067 ||||||| || || || ||||| | ||| ||||||||||||| ||| ||||| Sbjct 272540 TGTGGCAGGGCGGGAGGGCCATCTTCTTGATGTCGCTGGGGTTCCAGGCCGACATGATGA 272599 Query 30068 TGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCCACGGCGTTTTGC-AGCTGATCC 30123 |||| | ||| ||| | ||| ||| || || ||| || || ||||| || Sbjct 272600 TGCGTCGGTCGAAGGGGGTATTCTTGAGCTTGTGGATCACCTCG----GCGAGCTGGTCG 272655 Query 30124 ACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCAC 30183 || ||| ||| |||||| | | ||| |||||| || ||||| || | |||| Sbjct 272656 ACGCCCTGGCCCTGGTAGTCGGTGCGGGCGTCGACGTACTCGGCGCCGAAGTGGCGCCAC 272715 Query 30184 TGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCC 30243 ||||| ||||| || || |||||||| ||| | || | |||| | ||| |||||| Sbjct 272716 TGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGCGAAAGGCCGACCTTGTCG 272775 Query 30244 AAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTG 30303 | || || | || ||||| ||||||||||||| || ||| |||| ||| | Sbjct 272776 AGGAACTCGCGCGAGCCGTTCCCGTCCCAGATCTTGACGCCCGCCTCGCTCAGCGGCAGG 272835 Query 30304 GAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGAC 30362 || ||| ||||| || |||||| || ||||| | | |||||| ||||| Sbjct 272836 GACGACGTGCTGCCCTC-GATGAACCAGAGGAGCTCGGCGATGACGGCGCGGGTGAAGAC 272894 Query 30363 CCTCTTGGTCGTGAGGAGGGG 30383 | ||| ||||| |||||||| Sbjct 272895 GCGCTTCGTCGTCAGGAGGGG 272915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408608541330887