Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1774 123 5e-23 >seq1774 Length=381457 Score = 123 bits (136), Expect = 5e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| ||||| || ||||| || || || ||||| || | | ||| Sbjct 142558 ACGGAGGACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACC 142499 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||| || || || || ||||||||||| || | || || || ||||| || || ||||| Sbjct 142498 GTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGAGGGATGCCCTCCTT 142439 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || |||||||| | || || || ||||| || || ||| ||| || || | ||| || Sbjct 142438 GTCCTGAATCTTCGACTTGACGTTGTCAATAGTGTCGCTAGATTCCACCTCGAGAGTAAT 142379 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||| || |||| ||||| || || |||||||| Sbjct 142378 CGTCTTTCCCGTCAGGGTCTTGACGAAAATCTGCAT 142343 Score = 111 bits (122), Expect = 3e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || ||| || || | |||||| || || || ||||| || || || |||| Sbjct 142343 TACCACCGCGCAGACGAAGGACAAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAG 142284 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || || || || || ||||| || ||||| || | || || || || | Sbjct 142283 ACAGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGG 142224 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || || ||||| | || || || ||||| ||||| | || | Sbjct 142223 GAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATAGTATCCGACGACTCGA 142164 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || || |||||||| ||||||||||| || || |||||||| Sbjct 142163 CCTCGAGCGTGATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 142115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981804317596641