Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1461 233 3e-55 seq857 176 6e-38 seq1388 141 1e-27 seq1199 102 1e-15 seq869 93.3 6e-13 seq805 89.7 7e-12 >seq1461 Length=46181 Score = 233 bits (258), Expect = 3e-55 Identities = 364/509 (72%), Gaps = 16/509 (3%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || |||||||||||||| || ||||||||||||||| | |||| Sbjct 32684 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATTGACC 32742 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 | | ||| | ||||| ||| | | ||| |||||| |||||| Sbjct 32743 TGTCCAAGGACCTCCACGACTGGAACAACCGCATCAACGATGACGAGAAGTTCTTCATCT 32802 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||| |||| ||||| || ||||||| |||||||| || |||||||| | || Sbjct 32803 CCCACATCCTTGCCTTCTT-CGCCGCCTCTGATGGCATTGTCAATGAGAACCTTGTCGAG 32861 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || | |||||||| | || ||||| || | || ||||| ||||||||| Sbjct 32862 CGTTTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGCTGCTTCTACGGTTTCCAGATCATG 32921 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| || |||||||| || || || ||||||||| ||||||| | Sbjct 32922 ATGGAGAACATCCACTCCGAGACCTACTCTCTGCTCATTGACACCTACATCAAGGAGACC 32981 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 | | || | | ||||||| |||||| || || | || | | | || |||||| Sbjct 32982 GCCCAGCGCGCCTACCTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAGAAGGCC 33041 Query 1456132 GACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188 |||||||| || | ||||||| ||||||| ||| || ||||||| |||| || | Sbjct 33042 GACTGGGCCATCAGGTGGATCCAGGACAAGGA----CTCCAC-CTTTGCCCAGCGTCTGG 33096 Query 1456189 TCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATCTTTTGG 1456246 | | |||||||| ||||||||| ||||| ||| | | || | ||| ||||||| ||| Sbjct 33097 TTGCCTTTGCCGCCGTCGAGGGTATCTTCTTC-AGCGGAGCCTTTGCTTCCATCTTCTGG 33155 Query 1456247 CTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||||||||| || || ||||||||||| Sbjct 33156 CTCAAGAAGCGTGGTCTGATGCCCGGTCT 33184 Score = 122 bits (134), Expect = 1e-21 Identities = 182/253 (72%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| ||| |||||| || ||||| ||||| ||| ||| | ||||| || Sbjct 33294 ATCATCACCGATGCCGTCTCCATTGAGAAGGAGTTCCTCACCGACGCTCTGCCCTGCGCC 33353 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || ||||||||||||||||| |||||| |||||||||| | |||||||||||||| | Sbjct 33354 CTGCTCGGCATGAACGCCACC-CTCATGCAGCAGTACATTG-AGTTTGTCGCCGACCGTC 33411 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | || | || |||||| | || ||| |||| || ||||||| ||| | ||| Sbjct 33412 TCCTGGTTGCCCTCGGCAAC-GACAAGGTCTACAACTCGACCAACCCCTTCGACTTCATG 33470 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 ||| ||||| || | || ||||||||||| |||||| || | ||| || ||| Sbjct 33471 GAGAACATCTCCCTGGGTGGAAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAG 33530 Query 1456762 AAGGCCGGCGTCA 1456774 ||||| || |||| Sbjct 33531 AAGGCTGGTGTCA 33543 >seq857 Length=1029652 Score = 176 bits (194), Expect = 6e-38 Identities = 346/503 (69%), Gaps = 19/503 (4%) Strand=Plus/Minus Query 259682 CACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTT 259741 |||||||| | |||||| | ||||| | ||| ||| ||||| |||| ||||||| Sbjct 769928 CACAAGGACGAGCTCGACTCGGCCATTGTCTACGACCGTGACTTCAACTACCAGTACTTT 769869 Query 259742 GGTCTGGCGAC-CTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAGCG 259800 ||| | ||| |||| || | ||||||||| ||| | || | | |||||||| Sbjct 769868 GGTTTCAAGACTCTTGAGC-GCTCCTACCTGCTCAAGCTCGACGGCAAGATTGTCGAGCG 769810 Query 259801 GCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACAA 259860 |||||| | ||| |||||||||| ||| | ||| | |||| | | | || |||| Sbjct 769809 TCCCCAGCACATGATCATGCGTGTTGCCGTCGGCA--TCTGGGGT-GACAACATCGAGCG 769753 Query 259861 TGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTG-TTCACCTCAG 259919 || | ||| |||| | |||| ||||||| |||| || |||||| | Sbjct 769752 TGTCATTGAG-ACGTACA----ACCT-------CATGTCG-AGCAAGTGCTTCACCCACG 769706 Query 259920 CGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGT 259979 | ||||||| ||||| || || || || || | | ||| || |||||||| || Sbjct 769705 CCTCGCCCACCCTCTTCAACGCTGGTACCCCCCAGGCCCAGCTGTCTTCGTGCTTCCTCG 769646 Query 259980 TGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCA 260039 | |||||||||| || || || || ||||| ||||| |||||| || || | | Sbjct 769645 TCGACATGAAGGATGACAGCATTGACGGTATCTACGACACCCTCAAGACCTGTGCCATGA 769586 Query 260040 TCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCT 260099 |||||||| ||||||| ||||| ||| | ||| ||| | || ||| | ||| ||| Sbjct 769585 TCTCCAAGACGGCCGGTGGCATTGGTCTCAACGCCCACTGCATCCGTGCCACTGGCTCCT 769526 Query 260100 ACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACG 260159 || | || || |||||||| ||||||||| | | |||||||| || || | ||| Sbjct 769525 ACATTGCCGGTACCAACGGTACCTCCAACGGCATCATCCCCATGCTCCGTGTCTACAACA 769466 Query 260160 ACACGGCGCGCTACGTCGACCAG 260182 |||| || ||||||||||||||| Sbjct 769465 ACACTGCCCGCTACGTCGACCAG 769443 Score = 168 bits (186), Expect = 1e-35 Identities = 342/504 (68%), Gaps = 14/504 (3%) Strand=Plus/Minus Query 262913 AGCATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGA 262972 |||| ||| ||||||||| ||||||| || | |||||||||||||| |||||||||| Sbjct 768535 AGCACGGCACGCGCAACTCTCTGCTCGTCGCCCCCATGCCCACGGCCAGCACGTCGCAGA 768476 Query 262973 TCCTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGC 263032 |||||||||||| |||| |||||| | |||| |||||||||| ||||||| || | Sbjct 768475 TCCTGGGCAACAACGAGTGCTTCGAGCCCTACACGTCCAACATCTACTCGCGCCGTGTCC 768416 Query 263033 TCTCGGGCGACTTTACCGTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCC 263092 | | || || || || ||||||| | ||| ||||| | |||| | || |||| Sbjct 768415 TGGCTGGTGAGTTCCAGGTTGTCAACCCCTGGCTGCTCAAGGACCTGGTCGAGCTGGGCC 768356 Query 263093 TGTGGACGCCCGACTTTCGCGACCGGCTCATTGCGGCACAG-GGCTCGGTGCAGGGCTTT 263151 ||||| || || | |||| ||||||| | | || || || | ||| | | Sbjct 768355 TGTGGTCGGACGCGATGAAGAACCGCATCATTGCCG-AGAGCGGTTCTATCCAGAACATC 768297 Query 263152 GACGACGAGGAGGTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCC 263211 | || | || |||| |||||||||| | |||||| ||||||||| | || Sbjct 768296 CCCAAC------ATCCCCGACGATGTCAAGGCTCTGTACAAGACGGTGTGGGAGATTTCC 768243 Query 263212 AACCGGGTGACCATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCG 263271 | || | | | ||||| |||||||||| ||| | |||||||| |||||| Sbjct 768242 CAGCGCCAGGTTGTGCAGATGGCTGCCGACCGCGGTGCCTTTATCGACCAGTCGCAGTCG 768183 Query 263272 CTCAACCTGTACCTCGCCGACCCGACGGCCGAGAGCATCACGTCGATGCAC---GCCTAT 263328 |||||| | || | || || || | | |||||| |||||| ||| Sbjct 768182 CTCAACATCCACATGAAGGATCCTACTATGGGTAAGATCACGAGCATGCACTTTGCC--- 768126 Query 263329 GCGTGGCGTCGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAAC 263388 | ||| | || |||||||| ||||||||||| ||||||||| |||| ||| Sbjct 768125 GGCTGGAAGCTGGGTCTCAAGACGGGCATGTACTACCTGCGCACCACCGCCGCCGCCGCG 768066 Query 263389 GCCATTCAATTCACCGTCGATCAG 263412 |||| || |||||||| || ||| Sbjct 768065 CCCATCCAGTTCACCGTGGACCAG 768042 Score = 91.5 bits (100), Expect = 2e-12 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 262092 AGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACA 262151 || |||||| | || ||| |||||| | |||||| || | |||| |||| |||||| Sbjct 769144 AGCTCTGGTACTCGATCCTCGAGGCCCAGACCGAGACTGGTAACCCCTTCATGCTCTACA 769085 Query 262152 AGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA-CGACAGAGGCCAAC 262210 ||||| || ||||| | ||||||||| |||||||||| |||| | ||| ||||| Sbjct 769084 AGGACCACGCCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATCCGCAG-CTCCAAC 769026 Query 262211 CTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAACCTCTCG 262270 || ||||| |||||| | ||| | | ||| ||||| || |||||||| | Sbjct 769025 CTCTGCACTGAGATCATTGAGTACTGCGCTCCCGACGAGGTTGCCGTCTGCAACCTGGCC 768966 Query 262271 AGCGTGGCCCTGCCCAAGTTTGTC 262294 |||||||||| ||||||| Sbjct 768965 TCTCTGGCCCTGCCGTCGTTTGTC 768942 >seq1388 Length=85057 Score = 141 bits (156), Expect = 1e-27 Identities = 351/518 (68%), Gaps = 25/518 (5%) Strand=Plus/Plus Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317 |||||||||||| || || | ||| || |||||| || |||||| ||||| || Sbjct 3772 CTCCATCTCTCCGAGACGCAGGCCTCCGTCGCGCGAACGACCCTCGGTGGGCTGGCGTGT 3831 Query 1600318 GAGCATCTGGACGGGGCCGCGTGGTCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAG 1600377 ||| || | ||||||||| | || | ||| |||||||| | ||| ||| || Sbjct 3832 GAGGATGGCGCGGGGGCCGCGGGAGCGCGAGTGCATCTTGTCCTGGACCATGTGCTTGAG 3891 Query 1600378 GGCCTGGTAGTAGACCGGCGCCGTA-AAGATCAACGCCTCCATGGGCTCGCCGGTG-TGC 1600435 | ||||||||||| || ||||| |||| | ||||| | ||||||||| ||| ||| Sbjct 3892 GCGCTGGTAGTAGATGGG-GCCGTTGAAGACATAGGCCTCAAGGGGCTCGCCCGTGATGC 3950 Query 1600436 GGGTGGTAGAGCACCTCCTTGCCGTAGCGCTCGCATCCGTGGCGAGCCAACTCGGCGGCG 1600495 | ||| || | |||||||| | | | | |||| | || ||| |||| Sbjct 3951 CAGAGGTGAAGTAG-TCCTTGCCCTCCCAGGAGAAGCCGTTGTTCAGCAGCTCCTTGGCG 4009 Query 1600496 ACATCGTCGACGGTGACGCCGCCAAAGGGCGT-GCCGTCGCCCACATAGCCCT-----CG 1600549 || |||||||||| | | || |||| ||| |||| ||| ||| || | Sbjct 4010 ACCTCGTCGACGGGGTGGGAGCGGAAGG-CGTCGCCGAAGCCG---TAGTTCTTTTCGCC 4065 Query 1600550 CGGCAGGCCA----CCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGA 1600605 || | | | | |||||| ||| ||| | || |||||| | ||||||||||| Sbjct 4066 CGATATGACCGAGGCTTTGCCCGTCAGGCACTCGAGCAGCTTGCCGACCGTCATGCGCGA 4125 Query 1600606 CGGGATGGCGTGCGGGTTGATCACAATGTCGGGCGTGGCACCGCCGCG-AGGCGACCAGG 1600664 ||||| |||||||||| || | ||||||||||| ||| ||| | ||||| | | Sbjct 4126 CGGGAAACCGTGCGGGTTCATGATGATGTCGGGCGT--CACGCCCGTGTCGGCGA--ACG 4181 Query 1600665 GCATGTCCTCGGTGGAGCGC-ACGCTGCCCACGGTGCCCTTTTGGCCGTGGCGCGACGAC 1600723 |||||||||| ||| | | | | ||||||| ||||| || ||||| |||||||| Sbjct 4182 GCATGTCCTC-CTGGTCCACGATGATGCCCACCACACCCTTCTGTCCGTGACGCGACGAG 4240 Query 1600724 AGTTTGTCGCCCACCTCGGGCTGGCGCATGGCCCGCGT 1600761 | |||||||||| |||||| ||||| | |||||| Sbjct 4241 AACTTGTCGCCCAGCTCGGGTCGGCGCGTCTGCCGCGT 4278 >seq1199 Length=300581 Score = 102 bits (112), Expect = 1e-15 Identities = 129/176 (73%), Gaps = 1/176 (1%) Strand=Plus/Minus Query 332876 CGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGGCC 332935 ||||||||||| || || |||||| | |||||||| | | ||| |||||| || Sbjct 151463 CGCAGGATGGCGCATCGCGACTGCAGCGGCTCGATGATCTTGTTGGACTGGTTGCACGCA 151404 Query 332936 AGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGCC 332995 | ||| || |||||||| |||| | | ||||| || || |||||||| || || Sbjct 151403 AAGGCGAAGCGCGTCGTGTTGGAGTAGATCTCCATTGTACGGCGCAGGGCCTGCTGCGCG 151344 Query 332996 GCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGG 333051 | | || | || ||||||||||||||||||||||| |||||| | ||| ||||| Sbjct 151343 CCAGATGTCATGCTGTCGGCCTCGTCGAGGATGATGAGCTTGTGCCTCCC-TGCGG 151289 >seq869 Length=763108 Score = 93.3 bits (102), Expect = 6e-13 Identities = 114/147 (78%), Gaps = 14/147 (10%) Strand=Plus/Plus Query 165748 TGGCAGACCTG--GTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCA 165805 |||| |||||| ||| ||| || |||||| ||||| |||||||||||| |||| |||| Sbjct 681380 TGGCCGACCTGCTGTC-CGTCGG-CGCCGTGGGTGCCCGCACCACCGAGTCCCAGCTGCA 681437 Query 165806 CCGCGAGATGGCGTCGGCGCTGCCGC----TGCCCATTGGCTTCAAAAACAGCACCGACG 165861 ||||||| |||| | ||| ||| | | ||| | |||||||| ||| ||||||||| Sbjct 681438 CCGCGAGCTGGC--CAGCG--GCCTCAGTTTCCCCGTCGGCTTCAAGAACGGCACCGACG 681493 Query 165862 GCAGCGT-GGCGACGGCCCTCGATGCC 165887 ||||| | |||| | ||| |||| ||| Sbjct 681494 GCAGCCTAGGCGTC-GCCATCGACGCC 681519 >seq805 Length=824856 Score = 89.7 bits (98), Expect = 7e-12 Identities = 154/220 (70%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 1817560 ACCTCGGCGCGCGCGTC-TCAGACTGGGGCACATGGAGGTTCATCTCGTCGCCGTCAAAG 1817618 |||||||| || | || ||| || || || ||||||||||||||||| ||||| || Sbjct 782400 ACCTCGGCACGTGTCTCCTCACTTTGAGGAACGTGGAGGTTCATCTCGTCACCGTCGAAA 782459 Query 1817619 TCGGCATTGTAGGTGCCCGTGACGGCCAGGTTGAACCGCATGGTACGGCCGGGCATGGGC 1817678 || || ||||||| |||||| | |||||| | || | |||| |||||| | | Sbjct 782460 TCAGCGTTGTAGGGCGACGTGACCGACAGGTTCAGACGGAAGGTAGAATAGGGCAT-GAC 782518 Query 1817679 AC-CACCTTGTGCATGAGCATGGAGCCCATGTGGAGTGAGGGCTGCCGGTTCATCACCAC 1817737 || || ||| | |||||| || |||| || |||||||| ||||| | | | Sbjct 782519 ACGGACGCGGTGACCCATCATGGACTCCTTGTGCAGCGAGGGCTGACGGTTGAAGATGAT 782578 Query 1817738 GGCGTCGCCGGCGCGCAGGTGACGCTCGACTGTCCACCCA 1817777 | ||||||| | |||||||||||||| |||| ||| Sbjct 782579 GTAGTCGCCGTCCATAAGGTGACGCTCGACCTTCCAGCCA 782618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177635754106678