Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1774 134 1e-26 seq805 109 5e-19 seq1475 102 7e-17 >seq1774 Length=381457 Score = 134 bits (148), Expect = 1e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || |||||||| || | || ||| || |||| || ||||||||||| Sbjct 142539 GTGCTCTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCGTCCTCGAGCTGCTTACCA 142480 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| || | ||||||||||| | ||| | || |||||||||| ||||| ||| Sbjct 142479 GCAAAGATAAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTG 142420 Query 35660 AGAGTTGCCACC-GTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718 | |||| || |||||||| ||||||||||| | || ||||| || ||||||| || Sbjct 142419 AC-GTTGTCAATAGTGTCGCTAGATTCCACCTCGAGAGTAATCGTCTTTCCCGTCAGGGT 142361 Query 35719 TTTCACAAATATCTGCAT 35736 || || || |||||||| Sbjct 142360 CTTGACGAAAATCTGCAT 142343 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | || || | || || |||||||| || ||||| Sbjct 142078 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAA 142019 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| || |||||||||| |||||| ||| | || Sbjct 142018 AATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 141960 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| ||| || ||||||| ||||| || || || || | || || | Sbjct 141959 TGTCGATGGTGTCCGACGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGA 141900 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 141899 CAAAGATCTGCAT 141887 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | || || || | || || |||||||| || || || Sbjct 142306 CTCCTTCTGAATGTTGTAGTCAGACAGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAA 142247 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| || |||||||||| |||||| ||| | || Sbjct 142246 GATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 142188 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || ||| || ||||| | |||||| || || || ||||| || || | Sbjct 142187 TGTCAATAGTATCCGACGACTCGACCTCGAGCGTGATGGTCTTGCCGGTCAACGTCTTGA 142128 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 142127 CGAAGATCTGCAT 142115 Score = 100 bits (110), Expect = 3e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || |||||||| |||| | || || |||| || |||||||| || Sbjct 141855 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCGAGCTGCTTGCCA 141796 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| || | ||||||||||| | ||||| || |||||||||| |||||| |||| Sbjct 141795 GCAAAGATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTC 141736 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | | | | |||||| || || ||||| | ||||| || || || || Sbjct 141735 ACATTGTCGATGGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 141683 >seq805 Length=824856 Score = 109 bits (120), Expect = 5e-19 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || |||| || |||||||| || ||||| Sbjct 371865 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCAAA 371806 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| || | || |||||||||| |||||| ||| | | | Sbjct 371805 GATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 371746 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || ||||| | ||||| || || ||||||| || ||||| Sbjct 371745 GTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 371686 Query 35725 AAA 35727 || Sbjct 371685 GAA 371683 >seq1475 Length=277423 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || || || | || || |||||||| || ||||| Sbjct 220619 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAA 220560 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| || | | |||||||||| |||||| ||| | || Sbjct 220559 GATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 220501 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || |||||||| | ||||| || || ||||| | || || | Sbjct 220500 TGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTCCCCGTAAGGGTCTTGA 220441 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 220440 CGAAGATCTGCAT 220428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450783350080520