Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1774 125 7e-24 seq1475 114 1e-20 seq805 109 6e-19 >seq1774 Length=381457 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||| ||||| || ||||||||||| Sbjct 142569 CCGCCACGGAGACGGAGGACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAC 142510 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || ||| |||||||| || || ||||| || | ||||||||| || || || Sbjct 142509 AGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGAGGG 142450 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || ||||| ||| | |||||| |||||||| Sbjct 142449 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATAGTGTCGCTAGATTCCACC 142390 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||||| || || || || | || || |||||||| ||||| Sbjct 142389 TCGAGAGTAATCGTCTTTCCCGTCAGGGTCTTGACGAAAATCTGCAT 142343 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTC 134563 || ||||| ||||| || ||||| |||||||||||||| | || | ||| | || || Sbjct 142323 ACAAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGACAGC-GTGCGGCCATCCTC 142265 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 |||||| || || || || |||| |||||||| || || || ||||| || || || || Sbjct 142264 GAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 142205 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || || ||||| ||| | || || ||||| || || ||||| || ||||| || Sbjct 142204 GATCTTGGACTTGACGTTGTCAATAGTATCCGACGACTCGACCTCGAGCGTGATGGTCTT 142145 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || ||||| || ||||| Sbjct 142144 GCCGGTCAACGTCTTGACGAAGATCTGCAT 142115 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || || || ||||| || |||||||||||| Sbjct 142113 CCACCACGGAGGCGGAGGACGAGGTGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAG 142054 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| ||||| |||||||||| |||||||| || || || Sbjct 142053 AGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCCGGGGGA 141994 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | ||||| ||||| || || Sbjct 141993 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGACGACTCAACC 141934 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || ||||| | || || || || || ||||| Sbjct 141933 TCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 141887 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||| ||||| || |||||||||||| Sbjct 141885 CCACCACGGAGGCGAAGAACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 141826 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| |||||||| ||||| ||||| || | ||||||||| || || || Sbjct 141825 AGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGA 141766 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || || || ||| | |||||||| || || || Sbjct 141765 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGAGGACTCAACC 141706 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 ||||| || ||||| || ||||| Sbjct 141705 TCGAGGGTGATGGTCTTGCCGGT 141683 >seq1475 Length=277423 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||| ||||| || ||||||||||||| Sbjct 220654 CCACCACGGAGGCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTC 220595 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| ||||| ||||| |||| |||||||| || || || Sbjct 220594 AGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 220535 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | |||||||| || ||||| Sbjct 220534 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 220475 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || || || || || | || || ||||| || ||||| ||| Sbjct 220474 TCGAGGGTGATAGTCTTCCCCGTAAGGGTCTTGACGAAGATCTGCATCTTG 220424 >seq805 Length=824856 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||| ||||| || |||||||||||| Sbjct 371900 CCACCACGGAGGCGGAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 371841 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| || ||||| || || ||||| |||| ||||||||| || || || Sbjct 371840 AGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGG 371781 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | ||||| || || || || Sbjct 371780 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCCGAGGACTCGACC 371721 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAA 134704 ||||| || ||||| || || || | || || ||||| Sbjct 371720 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 371683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505386908503880