Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq1461 140 1e-27 seq857 111 5e-19 >seq1461 Length=46181 Score = 140 bits (154), Expect = 1e-27 Identities = 364/540 (67%), Gaps = 19/540 (4%) Strand=Plus/Plus Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396 || |||||| ||||||||||| || ||||||||| | ||| |||||| | || | Sbjct 32718 TTCTGGACCGCCGAGGAGATTGACCTGTCCAAGGACCTCCACGACTGGAACAACCGC--A 32775 Query 443397 TCTAGCCATGAACGCGAT-TTCTTCAAATGC---ATCTTGGCCTTCTTTGCACCGAGCGA 443452 || | | |||| || || ||||||| | | ||| | |||||||| || | || Sbjct 32776 TCAA-CGATGA-CGAGAAGTTCTTCATCTCCCACATCCTTGCCTTCTTCGCCGCCTCTGA 32833 Query 443453 CGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGC 443512 || || ||| |||||| || || ||||||| || ||| | | ||||||| Sbjct 32834 TGGCATTGTCAATGAGAACCTTGTCGAGCGTTTCAGCGGCGAGGTCCAGATCCCCGAGGC 32893 Query 443513 CCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCA 443572 |||| |||||||| ||||| | ||||||||||| ||| ||||| |||| || Sbjct 32894 TCGCTGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCTCT 32953 Query 443573 GTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCT-CATCGTTCA 443631 | | || | || ||| || || || || ||||| || | ||| || || || Sbjct 32954 GCTCATTGACAC-CTACATC--AAGGAGACCGCCCAGCGCGCCTACCTCTTCAACGC-CA 33009 Query 443632 T---GACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAG 443688 | ||||| || ||||| | ||| | |||||| | |||| || | || Sbjct 33010 TTGAGACCATCCCCTGCATCCGCAAGAAGGCCGACTGGGCCATCAGGTGGATCCAG-GAC 33068 Query 443689 AAAATCTC-AGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTT 443747 || ||| | ||| | | |||| || || || ||||| | ||||| || | || || Sbjct 33069 AAGGACTCCACCTTTGCCCAGCGTCTGGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTC 33128 Query 443748 AGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGAC 443807 ||||| ||| || || |||||||||||| | || |||||||| || |||| ||||||||| Sbjct 33129 AGCGG-AGCCTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTGAC 33187 Query 443808 CTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 ||| ||||| || ||| || ||||||||| | || |||||||||||| || || Sbjct 33188 CTTCTCCAACGAGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTCGCCTGCCTGCT 33247 >seq857 Length=1029652 Score = 111 bits (122), Expect = 5e-19 Identities = 365/549 (66%), Gaps = 30/549 (5%) Strand=Plus/Minus Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030 |||||| || || ||| ||||||| | ||||||| || ||||||||||| || || || Sbjct 769497 CGGCATCATCCCCATGCTCCGTGTCTACAACAACACTGCCCGCTACGTCGACCAGGGTGG 769438 Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACG 255090 | ||| ||||| || || ||| ||||||||| ||||| |||||||||||| | Sbjct 769437 CAACAAGCGCCCCGGTGCTTTCTGCATCTACCTTGAGCCTTGGCACGCCGACGTCTTCGA 769378 Query 255091 GTTTTTACTGCTGTCCGACAAGA---CCGGCACCGAGGAGCTGATCGCCCGCGACATCTA 255147 ||| | || |||| ||||| ||| | |||||| | || |||||| | | Sbjct 769377 GTTCCT--TGACCTCCG-CAAGAACCACGGAAAGGAGGAGGTCCGTGCTCGCGACCTGTT 769321 Query 255148 CACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGA-----GACC 255202 | || ||||| ||| || || || || ||||| ||||| || || | Sbjct 769320 CCTGGCCCTCTGGATTCCCGACCTCTTCAT--GAAGCGTG--TCGAGAAGAACGGTGA-C 769266 Query 255203 TGGAGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTT 255262 |||| ||||||||| |||||| | ||||| || | |||| |||||||||||| Sbjct 769265 TGGACCCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACGTCCACGGTGACGAGTTT 769206 Query 255263 GAAAAACTGTATCTGGAGTACGAGCGTGCCGGCCG-GTTCGTACGCCAAGTGCCCGCGAA 255321 || ||||| | |||||||| | | ||||| | || | | | | | | ||| | Sbjct 769205 GAGGCCCTGTACGAGAAGTACGAGAGGGAGGGCCGCGGCCGCAAGACGA-TCCGCGCTCA 769147 Query 255322 GAAGATCTGGAACACGATGGTGCGCATG--CAGCTGGAAACCGGAATGCCGTTCCTATTG 255379 |||| ||||| || |||| | || | | ||| || || || | || ||| | | Sbjct 769146 GAAGCTCTGGTACTCGATCCT-CG-AGGCCCAGACCGAGACTGGTAACCCCTTCATGCTC 769089 Query 255380 CACAAAGACCAC-ATAAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCTC 255438 |||| |||||| || |||| | | ||||| ||| ||||| || ||| |||| Sbjct 769088 TACAAGGACCACGCCAACCGCAAGAGC-AACCAGAAGAACCTGGGTACCATCCGCAGCTC 769030 Query 255439 GAACCTGTGCACCGAGATTACGTTGCACACGTCAGCGC---AAGAGGTGGCCGTTTGCAA 255495 ||||| ||||| ||||| | ||| || | || | | ||||| ||||| ||||| Sbjct 769029 CAACCTCTGCACTGAGAT--CATTGAGTAC-TGCGCTCCCGACGAGGTTGCCGTCTGCAA 768973 Query 255496 CTTGGCGTC 255504 | |||| || Sbjct 768972 CCTGGCCTC 768964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588298982340455