Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq857 203 4e-47 seq1461 105 8e-18 >seq857 Length=1029652 Score = 203 bits (224), Expect = 4e-47 Identities = 1050/1650 (64%), Gaps = 45/1650 (3%) Strand=Plus/Plus Query 110524 AATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTG 110583 ||| ||||| || || || ||| ||||| ||| || ||||| | | ||| ||||| Sbjct 768246 AATCTCCCACACCGTCTTGTACAGAGCCTTGACATCGTCGGGGATGTTGGGGATGTTCTG 768305 Query 110584 GATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTT 110643 ||| ||||| | | | | ||| | | |||||| | | ||||| || || | || Sbjct 768306 GATAGAACCGCTCTCGGCAATGATGCGGTTCTTCATCGCGTCCGACCACAGGCCCAGCTC 768365 Query 110644 CTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCT 110703 ||||| |||| || |||||||| |||||||| || ||| | | Sbjct 768366 GACCAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCCAGGACACGGCG 768425 Query 110704 CAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGT 110763 | ||||||||| | ||||| || || ||||| || || || |||| ||| || | || Sbjct 768426 CGAGTAGATGTTGGACGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGACGT 768485 Query 110764 GGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCG 110823 | ||| || ||||| || || | | ||| ||| || || | |||||||| | Sbjct 768486 GCTGGCCGTGGGCATGGGGGCGACGAGCAGAGAGTTGCGCGTGCCGTGCTCCTTGACCTG 768545 Query 110824 TTCCTTGAGAACATCCCAGTCGTA---GTT-GAGCTTGGTTTCACCTTCCCACATGTCAA 110879 |||||||| ||||| || | || ||| || || || | |||||||||| | Sbjct 768546 CTCCTTGAGCGAGTCCCACTCCCACAGGTCCGAG---GGCTTGACAT-CCCACATGTCGA 768601 Query 110880 ACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTT 110939 |||| || | || | ||| ||||| || || || | || |||| ||| | | | Sbjct 768602 ACTGGAGGATACCCTTGGAGGCGGGGGAGCCGGGGAACGACTCGTAGGGACCCTCCTCCT 768661 Query 110940 CAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 110999 |||| ||| | || || || ||||| || ||||| |||||||| | | Sbjct 768662 TGGCCAGCTCAACCGACTCCGTCACGGCGGCGTGGTAGATGGTCTCAAAGATCTGGAGGT 768721 Query 111000 TCATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATC 111054 ||| || || || || ||||| |||| || | || || | || Sbjct 768722 TCAGCTGGCGAGCCTCGGGCGACTCAAAGGGCATGCGCAGAGCCAGGAAGG-----CGTC 768776 Query 111055 CGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGT 111114 |||||||| || | ||||| || || || | ||| ||||| || || || || Sbjct 768777 GGCGAGACCCTGGATACCCAGGCCGATGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTC 768836 Query 111115 CTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT 111174 || ||||| || | || |||||||| | ||| || || | || | || Sbjct 768837 CTTGACGGGGTAGTAGTTGACGTCAATGATCCTGTTGAGGTTGCGGACGACGACACGCGT 768896 Query 111175 GATTTCATGAAGTTTTTCATAATCAAAA-GTGCGAGTCTCTTCATTGACATACTTTGGAA 111233 | || || || || | | || | | ||| |||| | | |||| || || | Sbjct 768897 CACCTCGTGCAGCTTGTTGAAGTCGTAGCGGGCGT-TCTCGTAGTCGACAAACGACGGCA 768955 Query 111234 GGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTT 111293 |||| | || |||| ||||| || || ||| || | | |||||| | || | Sbjct 768956 GGGCCAGAGAGGCCAGGTTGCAGACGGCAACCTCGTCGGGAGCGCAGTACTCAATGATCT 769015 Query 111294 CTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGC 111353 | || || | |||||| || || || |||| ||||| ||||| ||||| |||| Sbjct 769016 CAGTGCAGAGGTTGGAGCTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGG 769075 Query 111354 ACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCT 111413 ||||||||||||||| |||| | || ||||| ||||| | | ||| || | | Sbjct 769076 CGTGGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGGATCGAGT 769135 Query 111414 TCCA-AACATCGGCG-GCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGT 111471 ||| | | || | | || | | | ||| | | || |||||| ||||||||| Sbjct 769136 ACCAGAGCTTCTGAGCGCGGATCGTCTTGCG--GCCGCGGCCCTCCCTCTCGTACTTCTC 769193 Query 111472 GTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACA 111531 ||| ||||| |||||||| ||||| |||||| ||| || || || || || || Sbjct 769194 GTACAGGGCCTCAAACTCGTCACCGTGGACGTCGGCGAGGCCGGGGCACTCGTTGGGGCA 769253 Query 111532 GAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 111591 | || | ||| | ||| | ||| || ||||||||||| ||||| |||||||| || Sbjct 769254 CATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAG 769313 Query 111592 GGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAA 111650 || || || || | | ||| || |||| || | || ||||| || | |||| Sbjct 769314 GGCCAGGAACAGGTCGCGAGCACGGA-CCTCCTCCTTTCCGTGGTTCTTGCGGAGGTCAA 769372 Query 111651 GGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC-GATAGATCC----CTT 111705 ||||||| | || || |||||||| |||||||| |||| ||| || || || | Sbjct 769373 GGAACTCGAAGACGTCGGCGTGCCAAGGCTCAAGGTAGA-TGCAGAAAGCACCGGGGCGC 769431 Query 111706 TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 111765 | | | ||| | || | || ||||| || ||| ||| | || || ||||| || || Sbjct 769432 TTGTTG-CCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGTAGACACGGAGCATGGGGAT 769490 Query 111766 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 111825 || || | || ||| || || || ||| || | |||| | | || Sbjct 769491 GATGCCGTTGGAGGTACCGTTGGTACCGGCAATGTAGGAGCCAGTGGCACGGATGCAGTG 769550 Query 111826 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 111885 | || | ||||| || || ||| ||| ||||| ||||| | | || || | Sbjct 769551 GGCGTTGAGACCAATGCCACCGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTC 769610 Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945 |||||||||| || ||| ||||| || ||| |||||||| |||| ||| || Sbjct 769611 GTAGATACCGTCAATGCTGTCATCCTTCATGTCGACGAGGAAGCACGAAGACAGCTG-GG 769669 Query 111946 TCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTTG--GG 112001 || || |||||||| ||||||||||| || | ||||| |||| || |||| | Sbjct 769670 CCTGGGGGGTACCAGCGTTGAAGAGGGTGGGCGAGGCGTGGGTGAAGCA---CTTGCTCG 769726 Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061 |||| || ||| ||||| | |||| || |||| || || |||||||| || | Sbjct 769727 ACATGAGGTTGTACGTCTCAATGACACGCTCGATGTTGTCACCCCAGATGCCGACGGCAA 769786 Query 112062 CCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGA--AGATA 112119 | ||||||| ||||| ||| || || | | |||| |||||| |||| || || Sbjct 769787 CACGCATGATCATGTGCTGGGGACGCTCGACAATCTTGCCGTCGAGC--TTGAGCAGGTA 769844 Query 112120 GCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149 | |||||| || |||| ||||||||| Sbjct 769845 GGAGCGCTCAAGAGTCTTGAAACCAAAGTA 769874 >seq1461 Length=46181 Score = 105 bits (116), Expect = 8e-18 Identities = 333/505 (66%), Gaps = 22/505 (4%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| || || |||||||| |||||||||||||| ||| | ||| ||||| ||||| Sbjct 33526 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCACCCAGGGAGATGTTCTCCATG 33467 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 122484 ||||| || || || ||| ||| | | | | || | | |||| ||| Sbjct 33466 AAGTCGAAGGGGTTGGTCGAGTTGTAGACCTTGTCGTTGCCGAGGGCAACC------AGG 33413 Query 122485 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGG 122544 ||||| || | ||| |||||||||||| ||| | |||||| |||| ||| Sbjct 33412 AGACGGTCGGCGACAAACTCAATGTACTGCTGCATGAGGGTGGCGTTCATGCCGAGCAGG 33353 Query 122545 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 122604 || || || ||||| || |||| | |||||||| || || || | | |||| Sbjct 33352 GCGCAGGGCAGAGCGTCGGTGAGGAACTCCTTCTCAATGGAGACGGCATCGGTGATGATG 33293 Query 122605 GCGTGGAT-AGTTTC--GGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 122661 ||| ||| | | | | ||| | | | || | || | | || || ||| Sbjct 33292 TCGTAGATGACCTGCTTGCTAGCGCGGTTCTTGAGGTGAGAGTGCAGCAGG--CA-GGCG 33236 Query 122662 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGC 122721 || || |||||||||||| || || || || || || || |||||| ||||| ||| Sbjct 33235 AAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGC 33176 Query 122722 ATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACC 122780 || ||||| |||||||| | ||| | || | ||| || | ||| |||||||||||| Sbjct 33175 ATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCTCCGCTGAAGAAGATACC 33117 Query 122781 CTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACC 122839 ||| || ||||| |||| || || | ||| |||| | ||| | ||| | | | || Sbjct 33116 CTCGACGGCGGCAAAGGCAACCAGACGCTGGGCAAAGGTG-GAGTCCTTGTCCTGGATCC 33058 Query 122840 ATTTCATTGCCCATTTCGCCTTCTT 122864 | | || ||||| | |||||||| Sbjct 33057 ACCTGATGGCCCAGTCGGCCTTCTT 33033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628017720122400