Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq857 221 1e-52 seq1461 172 7e-38 >seq857 Length=1029652 Score = 221 bits (244), Expect = 1e-52 Identities = 1050/1646 (64%), Gaps = 33/1646 (2%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| ||||||||||| ||| |||||||| | | ||||| | Sbjct 768085 CGCAGGTAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGCATGCTCGTG 768144 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | ||| | || ||| | |||| || ||| | || || || ||||| ||| Sbjct 768145 ATCTTACCCATAGTAGGATCCTTCATGTGGATGTTGAGCGACTGCGACTGGTCGATAAAG 768204 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTC 118013 || || || || ||||| | |||| ||| || | || |||||||| ||| Sbjct 768205 GCACCGCGGTCGGCAGCCATCTG---CACAACCTGGCGCTGGGAAATCTCCCACACCGTC 768261 Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073 |||| || ||| | ||| || ||||| | ||| || ||||| || || | | | Sbjct 768262 TTGTACAGAGCCTTGACATCGTCGGGGATGTTGGGGATGTTCTGGATAGAACCGCTCTCG 768321 Query 118074 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 118133 | ||| | | |||||| | | ||||| || || | || || |||| | Sbjct 768322 GCAATGATGCGGTTCTTCATCGCGTCCGACCACAGGCCCAGCTCGACCAGGTCCTTGAGC 768381 Query 118134 AGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 118193 || |||||||| |||||||| || ||| || | | ||||| |||| | Sbjct 768382 AGCCAGGGGTTGACAACCTGGAACTCACCAGCCAGGACACGGCGCGAGTAGATGTTGGAC 768441 Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 ||||| ||||| |||||||| ||||| |||| ||| || | ||| ||| ||||||||| Sbjct 768442 GTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCCGTGGGCATG 768501 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCC 118313 || || | ||| || ||| || || | ||| | | | |||||||| | |||| Sbjct 768502 GGGGCGACGAGCAGAGAGTTGCGCGTGCCGTGCTCCTTGACCTGCTCCTTGAGCGAGTCC 768561 Query 118314 CAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAC 118373 || || | | | | || | | |||||| || |||||||||||||| | ||| Sbjct 768562 CACTCCCACAGGTCCGAGGGCTTGACATCCCACATGTCGAACTGGAGGATACCCTTGGAG 768621 Query 118374 GCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTC 118430 || || || || || | ||| || || ||||| ||| |||| || || ||| Sbjct 768622 GCGGGGGAGCCGGGGAACGACTCGTAGGGACCCTCCTCCTTGGCCAGCTCAACCGA-CTC 768680 Query 118431 GCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTC 118489 | || | ||| ||||| || || || ||||| || | |||| || | | |||| Sbjct 768681 -CGTC-ACGGCGGCGTGGTAGATGGTCTCAAAGATCTGGAGGTTCAGCTGGCGAG-CCTC 768737 Query 118490 GTCGGAATCAAACGCGAGTCGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGA 118548 | || ||||| | | || || | | || | || |||||||| |||| ||| | Sbjct 768738 GGGCGACTCAAAGGGCATGCG-CAGAGCCAGGAAGGCGTCGGCGAGACCCTGGATACCCA 768796 Query 118549 GGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCC 118608 |||| || ||||| || | ||| || || ||||| || ||||| || | || Sbjct 768797 GGCCGATGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTTGACGGGGTAGTAGTTGA 768856 Query 118609 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 118668 || || | ||| || || || | ||| || || | || || ||||| | | Sbjct 768857 CGTCAATGATCCTGTTGAGGTTGCGGACGACGACACGCGTCACCTCGTGCAGCTTGTTGA 768916 Query 118669 AATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTAC 118728 | || | | | |||| | | |||| || || ||||| | || ||||| || | Sbjct 768917 AGTCGTAGCGGGCGTTCTCGTAGTCGACAAACGACGGCAGGGCCAGAGAGGCCAGGTTGC 768976 Query 118729 ACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCT 118788 | || | ||| || | | |||||| || || || ||||| | ||| || || Sbjct 768977 AGACGGCAACCTCGTCGGGAGCGCAGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTGC 769036 Query 118789 TAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGT 118848 ||||| |||| |||||| || || ||| ||| |||||||| |||||| Sbjct 769037 GGATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGTGGTCCTTGTAGAGCATGA 769096 Query 118849 ATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGC 118907 | || | || ||||| || |||| || ||| || | | ||||| | || | ||| | Sbjct 769097 AGGGGTTACCAGTCTCGGTCTGGGCCTCGAGGATCGAGTACCAGAGCTTCTG-AGCGCGG 769155 Query 118908 ACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCA 118967 | || | | | || ||||| ||||||||| ||| ||||| |||||||| ||| Sbjct 769156 ATCGTCTTGCGGCCGCGGCCCTCCCTCTCGTACTTCTCGTACAGGGCCTCAAACTCGTCA 769215 Query 118968 CCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCC 119027 || | | || | ||| || || || | ||||| | ||| | ||| | ||| | Sbjct 769216 CCGTGGACGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTC 769275 Query 119028 TCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAG 119087 | ||| || ||||||||||||||||| || |||||||| ||| ||| || || ||| Sbjct 769276 TTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAACAGGTCGCGAGCA 769335 Query 119088 CGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGC 119147 || | || || | || || || || | || | || || | || || |||||| Sbjct 769336 CGGACCTCCTCCTTTCCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGACGTCGGCGTGC 769395 Query 119148 CACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTACGACGACCAGCCTGGTTTACA 119201 || || || ||||| | || | || | ||| | | ||| |||||| || Sbjct 769396 CAAGGCTCAAGGTAGATGCAGAAAGCACCGGGGCGCTT--GTTG-CCACCCTGGTCGACG 769452 Query 119202 TACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTT 119261 || | |||||| ||| | ||||| ||||| || ||||| || | ||| || || Sbjct 769453 TAGCGGGCAGTGTTGTTGTAGACACGGAGCATGGGGATGATGCCGTTGGAGGTACCGTTG 769512 Query 119262 GTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCC 119319 || || || || ||| | | |||| | || |||| || | |||||| || | Sbjct 769513 GTACCGGCAATGTAGGAGCC--AGTGGCACGGATGCAGTGGGCGTTGAGACCAATGCCAC 769570 Query 119320 CTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGT 119379 | ||| ||| ||||| || || | |||| || ||||||| || || || || Sbjct 769571 CGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCGTCAATGCTGT 769630 Query 119380 CACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCT-GGGTGTACCAGCGTTG 119438 || |||| | ||| ||||||||| |||| || ||||| ||| |||||||||||| Sbjct 769631 CATCCTTCATGTCGACGAGGAAGCACGAAGACAGCTG-GGCCTGGGGGGTACCAGCGTTG 769689 Query 119439 AAGAGAGTTGGTGTCGCGTGGATGAA 119464 ||||| || || | |||||| |||| Sbjct 769690 AAGAGGGTGGGCGAGGCGTGGGTGAA 769715 >seq1461 Length=46181 Score = 172 bits (190), Expect = 7e-38 Identities = 538/820 (66%), Gaps = 31/820 (4%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| ||||| ||||||||||||||||| ||||| || ||| | ||| |||||||| Sbjct 33526 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCACCCAGGGAGATGTTCTCCATG 33467 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841 || || || ||||| | ||||| | | | | || | | ||| | ||| Sbjct 33466 AAGTCGAAGGGGTTGGTCGAGTTGTAGACCTTGTCGTTGCCGAGGGCAACC------AGG 33413 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 ||||| || | ||| |||||||||||| ||| || |||||| |||| ||| Sbjct 33412 AGACGGTCGGCGACAAACTCAATGTACTGCTGCATGAGGGTGGCGTTCATGCCGAGCAGG 33353 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 || || || ||||| || |||| ||||||||||| || || || | |||| Sbjct 33352 GCGCAGGGCAGAGCGTCGGTGAGGAACTCCTTCTCAATGGAGACGGCATCGGTGATGATG 33293 Query 129962 GCGTGAATGGTCTCCGTGCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 130018 ||| ||| || | ||| || | | ||| | || | | || || ||| Sbjct 33292 TCGTAGATGACCTGCTTGCTAGCGCGGTTCTTGAGGTGAGAGTGCAGCAGG--CA-GGCG 33236 Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078 || || |||||||||||||||||| |||||||| || || |||||| |||||| ||| Sbjct 33235 AAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGC 33176 Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138 || ||||| |||||||| | |||||| || | | ||| | || ||||||||| ||| Sbjct 33175 ATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCTCCGCTGAAGAAGATACCC 33116 Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCA 130197 || || || || |||| ||||||| ||||||| | | | | |||| | | ||| Sbjct 33115 TCGACGGCGGCAAAGGCAACCAGACGCTGGGCAAAGGTG-GAGTCCTTGTCCTGGATCCA 33057 Query 130198 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 130257 | | || ||||| | ||||| || ||| || |||| ||||| || || | ||||| Sbjct 33056 CCTGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAG 32997 Query 130258 TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 130317 | | | | || |||||||| | || ||||| || || || ||| Sbjct 32996 GTAGGCGCGCTGGGCGGTCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTCTCGGA 32937 Query 130318 ATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTA 130376 |||| | | ||| || | ||| | ||||||| |||| || ||| ||||| | Sbjct 32936 GTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATCTGGA 32878 Query 130377 CCTCATCTGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAA 130433 |||| | || || | | || | |||||| ||||| ||||| || | || | Sbjct 32877 CCTC-GCCGCTGAAACG--CTCGACAAGGTTCTCATTGACAATGCCATCAGAGGCGGCGA 32821 Query 130434 AAAACGCCAGGATAT---ACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAGT 130490 | || || ||||| | | | | ||| |||| |||| | | | || | ||||||| Sbjct 32820 AGAAGGCAAGGATGTGGGAGATGAAGAACTTCTCGTCATCGTTGATGCGGTTGTTCCAGT 32761 Query 130491 CGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 ||| || ||||| || || || | |||||| || ||||| Sbjct 32760 CGTGGAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCA 32721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618421138329640