Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq857 226 3e-54 seq1461 118 1e-21 >seq857 Length=1029652 Score = 226 bits (250), Expect = 3e-54 Identities = 903/1394 (65%), Gaps = 33/1394 (2%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||| || ||| |||| || || || |||| || |||| Sbjct 769808 CCCCAGCACATGATCATGCGTGTTGCCGTCGGCATCTGGGGTGACAACATCGAGCGTGTC 769749 Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATG-TTCATTCACGCAACACCAACCCTC 104338 | ||||| ||| || ||||| |||| || |||| ||||| | || |||||| Sbjct 769748 ATTGAGACGTACAACCTCATGTCGAGCAAG---TGCTTCACCCACGCCTCGCCCACCCTC 769692 Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 ||||| |||||||| || |||| |||| |||||||| ||| || ||||| Sbjct 769691 TTCAACGCTGGTACCCCCCAGGCCCAGCTGTCTTCGTGCTTCCTCGTCGACATGAAGGAT 769632 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 ||| || |||||||||| | || || | | ||||| ||||| ||| ||| Sbjct 769631 GACAGCATTGACGGTATCTACGACACCCTCAAGACCTGTGCCATGATCTCCAAGACGGCC 769572 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 104518 || || ||||| | || ||| | | |||| | || ||| || || Sbjct 769571 GGTGGCATTGGTCTCAACGCCCACTGCATCCGTGCCACTGGCTCCTACATTGCCGGTACC 769512 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || ||| || | || || || || ||||| || || | ||| ||| || ||||| Sbjct 769511 AACGGTACCTCCAACGGCATCATCCCCATGCTCCGTGTCTACAACAACACTGCCCGCTAC 769452 Query 104579 GTAAATCAAGCTGGGCGTCGAAAG----GGATCTATC-GCAGTCTATCTTGAGCCATGGC 104633 || | || | ||| | | | | || || || ||| |||| |||||||| |||| Sbjct 769451 GTCGACCAGGGTGG-CAACAAGCGCCCCGGTGCTTTCTGCA-TCTACCTTGAGCCTTGGC 769394 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 |||| || || | ||||||||||| | || ||||| || | ||||||| || | Sbjct 769393 ACGCCGACGTCTTCGAGTTCCTTGACCTCCGCAAGAACCACGGAAAGGAGGAGGTCCG-T 769335 Query 104694 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 || ||||| || ||| || ||||||||||| || |||||||||||| | || ||| || Sbjct 769334 GCTCGCGACCTGTTCCTGGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCGAGAAG 769275 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | || | ||| | ||| | || || || || || || ||| |||| | | ||| Sbjct 769274 AACGGTGACTGGACCCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACGTCCACGGT 769215 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGG 104870 || |||||||| ||||| ||| |||||||| || | ||| | ||| | || |||| Sbjct 769214 GACGAGTTTGAGGCCCTGTACGAGAAGTACGA-GAGGGAGGGC-CGCGGCCGCAAGACGA 769157 Query 104871 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | | ||| | || | | ||| | | || ||| || | || ||||||||||||| || Sbjct 769156 TCCGCGCT-CAGAAGCTCTGGTACTCGATCCTCGAGGCCCAGACCGAGACTGGTAACCCC 769098 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 | |||||| ||||| ||| | |||| ||||| || || ||||| ||||| ||| Sbjct 769097 TTCATGCTCTACAAGGACCACGCCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATC 769038 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 || ||||| ||||| || || ||| | || | | || ||| || || Sbjct 769037 CGCAGCTCCAACCTCTGCACTGAGATCATTGAGTACTGCGCTCCCGACGAGGTTGCCGTC 768978 Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTTG 105107 || ||||| || || | || || || || ||| || | || || | | | | Sbjct 768977 TGCAACCTGGCCTCTCTGGCCCTGCCGTCGTTTGTCGA--CTACGAGAACGCCCGCTACG 768920 Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167 | | | || || ||||| || ||| ||| | ||||| ||||| | |||| Sbjct 768919 ACTTCAACAAGCTGCACGAGGTGACGCGTGTCGTCGTCCGCAACCTCAACAGGATCATTG 768860 Query 105168 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227 | || | |||||||| || ||||| || || ||| | ||||| || || | Sbjct 768859 ACGTCAACTACTACCCCGTCAAGGAGGCTCGCAACAGCAACATGCGCCACCGCCCCATCG 768800 Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATTCC 105286 | || ||| | ||||||||||| || | ||| | || || ||| | ||||| || Sbjct 768799 GCCTGGGTATCCAGGGTCTCGCCGACGCCTTCCTGGCTCTG-CGCATGCCCTTTGAGTCG 768741 Query 105287 GACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAG 105346 ||| || | | || | || ||||||||||| || |||||||| | ||| Sbjct 768740 CCCGAGGCTCGCCAGCTGAACCTCCAGATCTTTGAGACCATCTACCACGCCGC-CGTGAC 768682 Query 105347 GCGAGT--TCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 105404 | |||| ||| |||| ||| || ||||| || || | || || || || | Sbjct 768681 G-GAGTCGGTTGAGCTGGCCAAGGAGGAGGGTCCCTACGAGTCGTTCCCCGGCTCCCCCG 768623 Query 105405 CTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGAC 105463 | || |||||| | || || || || |||||||| | || || | | | || Sbjct 768622 CCTC-CAAGGGTATCCTCCAGTTCGACATGTGGGATGTCAAGCCCTCGGACCTGTGGGAG 768564 Query 105464 TGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523 ||||| | |||||||| | |||||||| | || || ||| ||| ||| | || Sbjct 768563 TGGGACTCGCTCAAGGAGCAGGTCAAGGAGCACGGCACGCGCAACTCTCTGCTCGTCGCC 768504 Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583 || ||||| || ||| ||| | || ||| |||| || || || ||||| || |||||| Sbjct 768503 CCCATGCCCACGGCCAGCACGTCGCAGATCCTGGGCAACAACGAGTGCTTCGAGCCCTAC 768444 Query 105584 ACGACGAACATCTA 105597 ||| | |||||||| Sbjct 768443 ACGTCCAACATCTA 768430 >seq1461 Length=46181 Score = 118 bits (130), Expect = 1e-21 Identities = 169/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| | ||||| | || | || || || | ||||| || || ||||| || | | Sbjct 32997 CTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAGAAGGCCGACTGGGCCATCAGG 33056 Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832 ||| | | |||| | | | ||||||| |||| || | || ||||| || || Sbjct 33057 TGGATCCAGGACAAGGACTCCA-CCTTTGCCCAGCGTCTGGTTGCCTTTGCCGCCGTCGA 33115 Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCA 94891 ||||||||||||| || |||| ||| | || | |||||||||||||| ||||| | Sbjct 33116 GGGTATCTTCTTCAGCGGAGCCTT-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTGA 33174 Query 94892 TGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||| ||||| ||||||||||||||| ||||| ||||||||||| |||||| Sbjct 33175 TGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGTCTCCAC 33227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583247538107560