Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq857 327 1e-84 seq23 156 5e-33 >seq857 Length=1029652 Score = 327 bits (362), Expect = 1e-84 Identities = 525/750 (70%), Gaps = 8/750 (1%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || ||| | || ||| |||||| || | ||||||| |||||||||| Sbjct 769795 TCATGCGTGTTGCCGTCGGCATCTGGGGTGACAACATCGAGCGTGTCATTGAGACGTACA 769736 Query 53253 ACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTA 53309 || | ||| ||| |||| ||| || |||||| |||| ||||| ||||||||||||| Sbjct 769735 ACCTCATGTCGAGC---AAGTGCTTCACCCACGCCTCGCCCACCCTCTTCAACGCTGGTA 769679 Query 53310 CGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACG 53369 | || | ||| |||| |||||||| || | |||||||||||| || |||| Sbjct 769678 CCCCCCAGGCCCAGCTGTCTTCGTGCTTCCTCGTCGACATGAAGGATGACAGCATTGACG 769619 Query 53370 GCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTA 53429 | |||||||| || |||||| |||||| ||||||||| | | ||||| || ||| Sbjct 769618 GTATCTACGACACCCTCAAGACCTGTGCCATGATCTCCAAGACGGCCGGTGGCATTGGTC 769559 Query 53430 TCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489 || || | | ||||||| | ||| | || || || ||||| | || Sbjct 769558 TCAACGCCCACTGCATCCGTGCCACTGGCTCCTACATTGCCGGTACCAACGGTACCTCCA 769499 Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 | || ||| | || |||||||| |||| ||||||||| ||||| |||||| ||||||||| Sbjct 769498 ACGGCATCATCCCCATGCTCCGTGTCTACAACAACACTGCCCGCTACGTCGACCAGGGTG 769439 Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609 | |||||| || | ||| ||||||||| ||||| |||||||||||| | | | Sbjct 769438 GCAACAAGCGCCCCGGTGCTTTCTGCATCTACCTTGAGCCTTGGCACGCCGACGTCTTCG 769379 Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTT 53668 |||| || || || || ||| || || | || ||| | || ||| || |||||||| Sbjct 769378 AGTTCCTTGACCTCCGCAAGAACCACGGAAAGGAGGAGGTCCG-TGCTCGCGACCTGTTC 769320 Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728 || || |||||||| |||||||||||| | || |||||| ||| || ||| | Sbjct 769319 CTGGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCGAGAAGAACGGTGACTGGACC 769260 Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788 || |||||||| |||||||||||||||||| | ||| ||||||| |||||| | | Sbjct 769259 CTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACGTCCACGGTGACGAGTTTGAGGCC 769200 Query 53789 ATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTA 53848 |||| || ||||| |||||||| | |||| | || || | || | Sbjct 769199 CTGTACGAGAAGTACGAGAGGGAGGGCCGCGGCCGCAAGACGATCCGCGCTCAGAAGCTC 769140 Query 53849 TGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGAT 53908 ||| | | |||||| || |||| ||||| || | || | |||| ||||||||| Sbjct 769139 TGGTACTCGATCCTCGAGGCCCAGACCGAGACTGGTAACCCCTTCATGCTCTACAAGGAC 769080 Query 53909 TCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 | |||| |||||||||||||||||| Sbjct 769079 CACGCCAACCGCAAGAGCAACCAGAAGAAC 769050 Score = 212 bits (234), Expect = 7e-50 Identities = 570/856 (67%), Gaps = 32/856 (4%) Strand=Plus/Minus Query 55097 GACTTTGACAAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATC 55156 ||||| ||||||| ||||| ||||||||||| || || ||||| ||| || |||| Sbjct 768920 GACTTCAACAAGCTGCACGAGGTGACGCGTGTCGTCGTCCGCAACCTCAACAGGATCATT 768861 Query 55157 GACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCATC 55216 ||| || |||||||| | | ||| ||||| |||| | || ||||| |||||| Sbjct 768860 GACGTCAACTACTACCCCGTCAAGGAGGCTCGCAACAGCAACATGCGCCACCGCCCCATC 768801 Query 55217 GCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCCTTCGACTCG 55276 | | | ||| | ||||| | |||||| |||| || || | ||||||| || ||| Sbjct 768800 GGCCTGGGTATCCAGGGTCTCGCCGACGCCTTCCTGGCTCTGCGCATGCCCTTTGAGTCG 768741 Query 55277 GAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCGA 55335 ||||| | | |||| | ||||| || | ||||||| || || | Sbjct 768740 CCCGAGGCTCGCCAGCTGAACCTCCAGATCTTTGAGAC-CATCTACCACGCCGCCGTGAC 768682 Query 55336 GGAGTCGTGTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCAGC 55395 ||||||| | | ||||| | | ||||| |||||||| |||||| | || || || Sbjct 768681 GGAGTCGGTTGAGCTGGCCAAGGAGGAGGGTCCCTACGAGTCGTTCCCCGGCTCCCCCGC 768622 Query 55396 TGACAAGGGACTTCTCCAGTTCGATCTATGGGG---CAAG---TCTGACCCCATG---TT 55446 |||||| | ||||||||||| | |||| |||| || |||| | | Sbjct 768621 CTCCAAGGGTATCCTCCAGTTCGACATGTGGGATGTCAAGCCCTCGGACCTGTGGGAGTG 768562 Query 55447 TGACAAGTTGAAGCATGACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGTGGCGCC 55506 ||| | | ||| | | | | | ||| |||||||| |||||||| || || Sbjct 768561 GGACTCGCTCAAGGAGCAGGTCAAGGAGCACGGCACGCGCAACTCTCTGCTCGTCGCCCC 768502 Query 55507 AATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCCGTACAC 55566 ||||| || || ||| | |||||| |||||||||||||| |||||||| ||||| Sbjct 768501 CATGCCCACGGCCAGCACGTCGCAGATCCTGGGCAACAACGAGTGCTTCGAGCCCTACAC 768442 Query 55567 GACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAACAAGCACCT 55626 | ||||||||||| |||||| ||| || |||||||| | ||||| || Sbjct 768441 GTCCAACATCTACTCGCGCCGTGTCCTGGCTGGTGAGTTCCAGGTTGTCAACCCCTGGCT 768382 Query 55627 CGTCAAGGACCTGCAGAAGATCAACAAGTGGAACC-CGCAGATCAAGA--CGGATATTGT 55683 ||||||||||| || | | |||| ||| ||| |||| || || | | Sbjct 768381 GCTCAAGGACCTGGTCGAGCTGGGCCTGTGGTCGGACGC-GATGAAGAACCGCATCAT-T 768324 Query 55684 GCGGAACGGGGGGTCCGTCCAGAA--TCTGGAGATTCCTCTGCG-TCTCAAGGAGATTTA 55740 || || | || || ||||||| || | ||| | || | |||||| | || Sbjct 768323 GCCGAGAGCGGT-TCTATCCAGAACATCCCCAACATCCCCGACGATGTCAAGGCTCTGTA 768265 Query 55741 CCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTG---ACATGAGTGCTGATCGTGG 55797 | |||||||||||||||| | ||| | | | ||| | ||| ||| || || || Sbjct 768264 CAAGACGGTGTGGGAGATTTCCCAGC---GCCAGGTTGTGCAGATGGCTGCCGACCGCGG 768208 Query 55798 TGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAA 55857 ||| | ||||||||||| ||||| || |||||| |||| || ||||| | ||| || Sbjct 768207 TGCCTTTATCGACCAGTCGCAGTCGCTCAACATCCACATGAAGGATCCTACTATGGGTAA 768148 Query 55858 GTT---GAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTA 55914 | | |||| ||||||||| ||| |||||| ||| ||||||||||| |||||||| Sbjct 768147 GATCACGAGC---ATGCACTTTGCCGGCTGGAAGCTGGGTCTCAAGACGGGCATGTACTA 768091 Query 55915 TCTGCGGACCCGCGCC 55930 ||||| ||| |||| Sbjct 768090 CCTGCGCACCACCGCC 768075 >seq23 Length=618107 Score = 156 bits (172), Expect = 5e-33 Identities = 214/299 (72%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085 || ||||||||||| || | ||||| || || ||| || || || |||| ||||| Sbjct 289817 CGGGTGAAGATGTAACGAGGACTGGCAGCGTCGGAGCCTCCGGCAAGACGCGAACCAAAG 289758 Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145 | || |||||||||| ||||| |||||||| ||| || || ||||| |||| | Sbjct 289757 TTACCGCTGGGCTCGAGGCAGTTGACGTTGTTGGAGCCGACAAAGTTCTGTGCCAGACCA 289698 Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205 | || || ||| ||| | ||||||||||| || || || || || | |||||| Sbjct 289697 ATGATTGTCTGCTGAAGAGACTGCTCACCGTGGTGGTAGGCTGTGTGTTCGGAGATGTAA 289638 Query 152206 CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265 || ||||||| |||||||| ||||| | ||||||| ||||| ||||||||||| Sbjct 289637 CCAGCCAACTCGACCACCTTCTTGTCCTTGATCAGGTTGCGCTTGAAGCAGGCGTAAATG 289578 Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324 ||||||||||| || || | |||||| | || |||||| || ||| || |||| Sbjct 289577 ACCTTGCGCTGTCCAGGCTTGAGACCGTCAATAACAGAAGGAATGGATCGCATGTTGTC 289519 Score = 138 bits (152), Expect = 1e-27 Identities = 196/274 (72%), Gaps = 4/274 (1%) Strand=Plus/Minus Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358 ||||| ||||| |||||||||| || ||||| || ||| || |||||||||| ||| Sbjct 289820 AGGCGGGTGAAGATGTAACGAGGACTGGCAGCGTCGGAGCCTCCGGCAAGACGCGAACCA 289761 Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418 || | || || ||||| | | ||| | |||||||| ||| |||||||| || |||| Sbjct 289760 AAGTTACCGCTGGGCTCGAGGCAGTTGACGTTGTTGGAGCCGACAAAGTTCTGTGCCAGA 289701 Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478 | || || || || | |||||| ||||| || || || || || | | | Sbjct 289700 CCAATGATTGTCTGCTGAAGAGACTGCTCACCGTGGTGGTAGGCTGTGTGTTCGGAGATG 289641 Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536 || || |||| || |||||||| |||| ||| ||||||| ||||| |||||| | Sbjct 289640 TAACCAGCCAACTCGACCACCTTCTTGTCCTTGA--TCAGGTTGCGCTTGAAGCAGGCGT 289583 Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATC 117570 |||| ||||||||||| | ||||| ||||| || Sbjct 289582 AAATGACCTTGCGCTGTCCAGGCTTGAGACCGTC 289549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547203557676200