Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq857 381 7e-101 seq1774 181 1e-40 seq23 165 9e-36 seq1475 161 1e-34 seq805 147 2e-30 >seq857 Length=1029652 Score = 381 bits (422), Expect = 7e-101 Identities = 945/1417 (67%), Gaps = 34/1417 (2%) Strand=Plus/Plus Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCG 80415 ||||| || || ||| || ||| || | ||| | ||||| ||||| || |||| Sbjct 768403 AACTCACCAGCCAGGACACGGCGCGAGTAGATGTTGGACGTGTAGGGCTCGAAGCACTCG 768462 Query 80416 TTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTC 80475 ||||| || |||||||| | |||||| ||||| ||||| ||| |||| | ||| || || Sbjct 768463 TTGTTGCCCAGGATCTGCGACGTGCTGGCCGTGGGCATGGGGGCGACGAGCAGAGAGTTG 768522 Query 80476 CGCAGGCCGTGCTTCTTGATATCCTC---GCGCAAATCTGAC---CAAAAATCAACCCCA 80529 ||| |||||||| ||||| | ||| | || | || || || | || | | Sbjct 768523 CGCGTGCCGTGCTCCTTGACCTGCTCCTTGAGCGAGTCCCACTCCCACAGGTC----CGA 768578 Query 80530 ACGCTGTGAC--CCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGA 80587 ||| |||| ||||||||||| ||| | ||| |||| || || || || || | || Sbjct 768579 GGGCT-TGACATCCCACATGTCGAACTGGAGGATACCCTTGGAGGCGGGGGAGCCGGGGA 768637 Query 80588 ACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGAT 80647 ||| |||||| || |||||| ||||||||||||| ||||||| | | ||| ||||| | Sbjct 768638 ACGACTCGTAGGGACCCTCCTCCTTGGCCAGCTCAACCGACTCCGTCACGGCGGCGTGGT 768697 Query 80648 AAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGC 80707 | ||| |||||||| ||||| ||| |||| || || || | || || Sbjct 768698 AGATGGTCTCAAAGATCTGGAGGTTCAGCTGGCGAGCCTCGGGCGACTCAAAGGGCATGC 768757 Query 80708 CCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCT 80767 || || ||| |||| || || ||||| | || | | |||| |||||||||||| Sbjct 768758 GCAGAGCCAGGAAGGCGTCGGCGAGACCCTGGATACCCAGGCCGATGGGGCGGTGGCGCA 768817 Query 80768 TGTTCGATCGCTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGG 80826 |||| | | || |||||| | ||||| |||| || |||| | ||| ||| Sbjct 768818 TGTT-GCTGTTGCGAGCCTCCTTGACGGGGTAGTAGTTGACGTCAATGATCCTGTTGAGG 768876 Query 80827 TTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGG---TTCCCC 80883 ||||| || || || || || || || || || | |||||| | || ||| | Sbjct 768877 TTGCGGACGACGACACGCGTCACCTCGTGCAGCTTGTTGAAGTCGTAGCGGGCGTTCTCG 768936 Query 80884 T--TC-ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCA 80940 | || ||||| | ||| ||| ||| || ||||| ||||| ||||| ||||| || | | Sbjct 768937 TAGTCGACAAACGACGGCAGGGCCAGAGAGGCCAGGTTGCAGACGGCAACCTCGTCGGGA 768996 Query 80941 TCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTC 81000 | |||| | ||| || ||||| | || || || ||||||||||| ||| Sbjct 768997 GCGCAGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTACCCAGGTTCTTC 769056 Query 81001 TGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACC 81060 ||||| |||| |||| |||||||||| |||| | ||| |||| |||||| | Sbjct 769057 TGGTTGCTCTTGCGGTTGGCGTGGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTC 769116 Query 81061 TGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCT 81120 || | || |||||| | || ||| | || | || || | ||||||| ||| Sbjct 769117 TGGGCCTCGAGGATCGAGTACCAGAGCTTCTGAGCGCGGATCGTCTTGCGGCCGCGGCCC 769176 Query 81121 TCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCT 81180 || | | ||||| |||| | || |||| | ||||||| | || | |||| | Sbjct 769177 TCCCTCTCGTACTTCTCGTACAGGGCCTCAAACTCGTCACCGTGGACGTCGGCGAGGCCG 769236 Query 81181 GGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAA 81240 ||||||||||| |||||||| ||| |||||| || ||||| ||| ||||||||| Sbjct 769237 GGGCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAG 769296 Query 81241 GCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTG 81299 ||| || ||||||||||| |||||||||||| ||| || ||||||| | || || Sbjct 769297 AGGTCGGGAATCCAGAGGGCCAGGAACAGGTCGCGAGCA-CGGACCTCCTCCTTTCCGTG 769355 Query 81300 GTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGC 81359 ||| ||| | || || || || | || ||| || ||||| ||||| || || | | Sbjct 769356 GTTCTTGCGGAGGTCAAGGAACTCGAAGACGTCGGCGTGCCAAGGCTCAAGGTAGATGCA 769415 Query 81360 GATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATAC 81416 || | || ||| ||||||||||| |||||| |||||||| ||| | || Sbjct 769416 GAAAGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGTAGAC 769475 Query 81417 ACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTT 81476 ||| | ||| |||||||| || | || |||||| ||||| | || || || | Sbjct 769476 ACGGAGCATGGGGATGATGCCGTTGGAGGTACCGTTGGTACCGGCAATGTAGGAGCCAGT 769535 Query 81477 GGCGCGCA--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCA 81534 ||| || | | || ||| ||||| |||||||| | | ||| || ||| ||| Sbjct 769536 GGCACGGATGCAGTGGGCGTTG--AGACCAATGCCACCGGCCGTCTTGGAGATCATGGCA 769593 Query 81535 CACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAA 81594 || || | ||| || || || || || ||||| || | |||||||| | | ||| Sbjct 769594 CAGGTCTTGAGGGTGTCGTAGATACCGTCAATGCTGTCATCCTTCATGTCGACGAGGAAG 769653 Query 81595 CAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAA 81652 || |||| || |||| | | | || || ||||| || || || | ||||| Sbjct 769654 CACGAAGACAGCT--GGGCCTGGGGGGTACCAGCGTTGAAGAGGGTGGGCGAGGCGTGGG 769711 Query 81653 TGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGT 81712 |||| | | | ||||| |||| || || || |||| || || | |||||| Sbjct 769712 TGAAGCACTTGCTCGACATGAGGTTGTACGTCTCAATGACACGCTCGATGTTGTCACCCC 769771 Query 81713 GAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749 || |||| || |||||||| | ||||| |||||| Sbjct 769772 AGATGCCGACGGCAACACGCATGATCATGTGCTGGGG 769808 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || ||||| |||||||||||||||||||| ||| |||||||||| | |||||| Sbjct 768082 GTGCGCAGGTAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGCATGCTC 768141 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 ||| ||| | | || || | || |||| |||||| || ||||| ||||| ||| Sbjct 768142 GTGATCTTACCCATAGTAGGATCCTTCATGTGGATGTTGAGCGACTGCGACTGGTCGATA 768201 Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180 || || || || || || ||||| Sbjct 768202 AAGGCACCGCGGTCGGCAGCCAT 768224 >seq1774 Length=381457 Score = 181 bits (200), Expect = 1e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || || ||||| |||||||| ||||| || || | Sbjct 142343 ATGCAGATTTTCGTCAAGACCCTGACGGGAAAGACGATTACTCTCGAGGTGGAATCTAGC 142402 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | || ||||||||||||||||| || ||||| |||||| Sbjct 142403 GACACTATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAG 142462 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||||||||| |||||||| | ||| ||||| | ||||| || Sbjct 142463 CAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTGTCTGACTACAAC 142522 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| ||||||||| || ||| | ||||| || || || || Sbjct 142523 ATCCAGAAGGAGAGCACTCTTCACCTGGTCCTCCGTCTCCGTGGCGGCCA 142572 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || ||||||||||| || || || ||||||||||| Sbjct 141887 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCGTCG 141946 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || || |||||||||||||| ||||| || |||||| Sbjct 141947 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 142006 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||||||||| ||||| || ||||||| || || || | ||||| || Sbjct 142007 CAGCGCCTGATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTCTCCGACTACAAC 142066 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || ||| | || || || ||||| Sbjct 142067 ATCCAGAAGGAGTCGACACTCCACCTCGTCCTCCGCCTCCGTGGTGG 142113 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||||||| | ||||||||||| || || || ||||| ||||| Sbjct 142115 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACCATCACGCTCGAGGTCGAGTCGTCG 142174 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| || | ||| | || || |||||||||||||| ||||| || |||||| Sbjct 142175 GATACTATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 142234 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||||| || || || | ||||| || Sbjct 142235 CAGCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACGCTGTCTGACTACAAC 142294 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || || || ||| | ||||| |||||||| Sbjct 142295 ATTCAGAAGGAGTCGACGCTGCACCTTGTCCTTCGTCTGCGCGGTGG 142341 Score = 150 bits (166), Expect = 2e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || || ||||||||||| || | ||| | ||| ||||| | Sbjct 141683 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACCATCGACAATGTGAAGTCG 141742 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| |||||||| |||||||||||||| || |||||||| ||| Sbjct 141743 AAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTCATCTTTGCTGGCAAG 141802 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || |||||||| | ||||| || | ||||| || |||| ||||| ||| || || Sbjct 141803 CAGCTCGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAAGGAGAGCACCCTCCAC 141862 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || || | || || || ||||| Sbjct 141863 CTGGTTCTTCGCCTCCGTGGTGG 141885 >seq23 Length=618107 Score = 165 bits (182), Expect = 9e-36 Identities = 290/420 (69%), Gaps = 2/420 (0%) Strand=Plus/Plus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTG-TC 32042 ||||| ||||||||| |||||||||||| || ||||||||| ||||| |||||| || Sbjct 289549 GACGGTCTCAAGCCTGGACAGCGCAAGGTCATTTACGCCTGCTTCAAGCGCAACCTGATC 289608 Query 32043 GAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCA 32102 || |||| |||||||| || || | || ||| | | || || || ||||| ||||| Sbjct 289609 AAG-GACAAGAAGGTGGTCGAGTTGGCTGGTTACATCTCCGAACACACAGCCTACCACCA 289667 Query 32103 CGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAA 32162 ||| ||| ||| || ||| || || | || || |||||||||||||| | || Sbjct 289668 CGGTGAGCAGTCTCTTCAGCAGACAATCATTGGTCTGGCACAGAACTTTGTCGGCTCCAA 289727 Query 32163 TAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGA 32222 ||| | |||| |||||||| || | ||||| | || || ||||| ||| || Sbjct 289728 CAACGTCAACTGCCTCGAGCCCAGCGGTAACTTTGGTTCGCGTCTTGCCGGAGGCTCCGA 289787 Query 32223 TGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTTCGA 32282 ||||| || | ||||||||||||||||| || | || | |||| ||||||||| Sbjct 289788 CGCTGCCAGTCCTCGTTACATCTTCACCCGCCTGTCCCCCTTTGCGCGTAAGATTTTCAG 289847 Query 32283 CCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGT 32342 ||| ||| || || |||| |||| | | || || || || | |||| || Sbjct 289848 CCCCCTGGATGAGCCGAGTCTCACGTACCAGTACGAGGAAGGCAAGAGTATCGAACCCAA 289907 Query 32343 GTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402 | ||| || || || || ||| | | || |||||||| || || ||||| || || Sbjct 289908 TGTGTACGCGCCTGTCCTGCCAATGGTGCTCGTCAACGGTGCCGATGGTATCGGTACAGG 289967 >seq1475 Length=277423 Score = 161 bits (178), Expect = 1e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| ||||| || |||||||| || || ||||| ||||| Sbjct 220428 ATGCAGATCTTCGTCAAGACCCTTACGGGGAAGACTATCACCCTCGAGGTGGAGTCTTCC 220487 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || || |||||||||||||| || || || |||||| Sbjct 220488 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 220547 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || |||||||| ||||| || ||||||| || || || ||| ||||| || Sbjct 220548 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTGAGC-GACTACAA 220606 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || || ||| | || || || ||||| Sbjct 220607 CATCCAGAAGGAGTCCACTCTCCACCTGGTCCTCCGCCTCCGTGGTGG 220654 >seq805 Length=824856 Score = 147 bits (162), Expect = 2e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || |||||||| || || || ||||| ||||| || | ||| Sbjct 371682 CTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCAT 371741 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 || ||| | ||| | || || |||||||||||||| || || || |||||||||||||| Sbjct 371742 TGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCT 371801 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || ||||| || ||||| || ||||| | || ||||| | ||||| || |||| || Sbjct 371802 GATCTTTGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAA 371861 Query 27594 GGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| ||||| || || || ||| | || || || ||||| Sbjct 371862 GGAGTCCACCCTGCACCTGGTCCTCCGCCTCCGTGGTGG 371900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570297432567280