Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1199 111 1e-19 >seq1199 Length=300581 Score = 111 bits (122), Expect = 1e-19 Identities = 201/290 (69%), Gaps = 7/290 (2%) Strand=Plus/Plus Query 29758 ATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCAC 29817 ||| || ||||| |||| | | ||||||||| ||||| || | || | ||| |||| Sbjct 272157 ATGCGGCTCGTACCCCTTGATGACGAAATCCTCAGCCTTCCAGCCATCGATGCTG-CCAC 272215 Query 29818 CCT----CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCT 29873 ||| |||| ||| || ||| ||| | || || | ||| ||||| |||| Sbjct 272216 CCTTTTCCCTGGAAATCTCCAAGTCGGGGAAGACACGCGGTTCACGCTCCAGCTGCGTCT 272275 Query 29874 TCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTG-GACAAACTCT 29932 ||| | || |||| || ||||| ||||| || || |||| | || | || | | Sbjct 272276 CCAGAGCCTCGACGTGGTCAAGGTAAACGTGCGCATCACCCATGACATGCGTCAGGCCC- 272334 Query 29933 CCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATG 29992 ||||| | || || || || || ||||||| |||||| |||| |||||| ||||| Sbjct 272335 CCCGGCACCAGGTCGCACACATGGGCAATCATGTGCGTGAGCAGAGCGTAGCTAGCGATA 272394 Query 29993 TTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042 || ||||| || || | ||||| || | |||||||||||| |||||||| Sbjct 272395 TTGAAGGGCACTCCCAAGCCCATATCGCACGACCTCTGGTACAGCTGACA 272444 Score = 102 bits (112), Expect = 7e-17 Identities = 268/403 (67%), Gaps = 16/403 (4%) Strand=Plus/Plus Query 30062 ACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30118 ||||| ||||| | ||||| ||||| || || || ||||| | ||| || Sbjct 272521 ACGTAGAACTGGGCAAACATG---TGGCAGGGCGGGAGGGCCATCTTCTTGATGTCGCTG 272577 Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCC 30175 ||||||||||| ||| ||||||||| | ||| ||| | ||| ||| || || | Sbjct 272578 GGGTTCCAGGCCGACATGATGATGCGTCGGTCGAAGGGGGTATTCTTGAGCTTGTGGATC 272637 Query 30176 ACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTA 30234 || || || ||||| || || ||| ||| |||||| | | ||| ||| Sbjct 272638 ACCTCG----GCGAGCTGGTCGACGCCCTGGCCCTGGTAGTCGGTGCGGGCGTCGACGTA 272693 Query 30235 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30294 ||| || ||||| || | ||||||||| ||||| || || |||||||| ||| | || | Sbjct 272694 CTCGGCGCCGAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCG 272753 Query 30295 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30354 |||| | ||| |||||| | || || | || ||||| ||||||||||||| || Sbjct 272754 GTGCGAAAGGCCGACCTTGTCGAGGAACTCGCGCGAGCCGTTCCCGTCCCAGATCTTGAC 272813 Query 30355 CCCCTTCTCAGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCT 30413 ||| ||| ||| ||| ||| ||||| || |||||| || ||||| Sbjct 272814 GCCCGCCTCGCTCAGCGGCAGGGACGACGTGCTGCCCTC-GATGAACCAGAGGAGCTCGG 272872 Query 30414 CCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 | | |||||| ||||| | ||| ||||| |||||||| Sbjct 272873 CGATGACGGCGCGGGTGAAGACGCGCTTCGTCGTCAGGAGGGG 272915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406301392479348