Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq1199 113 4e-20 >seq1199 Length=300581 Score = 113 bits (124), Expect = 4e-20 Identities = 201/289 (70%), Gaps = 7/289 (2%) Strand=Plus/Plus Query 29531 TGAGGGTCGTAGCCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 29590 || || ||||| |||| | | ||||||||| ||||| || | || | ||| ||||| Sbjct 272158 TGCGGCTCGTACCCCTTGATGACGAAATCCTCAGCCTTCCAGCCATCGATGCTG-CCACC 272216 Query 29591 CT----CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCT 29646 || |||| ||| || ||| ||| | || || | ||| ||||| || Sbjct 272217 CTTTTCCCTGGAAATCTCCAAGTCGGGGAAGACACGCGGTTCACGCTCCAGCTGCGTCTC 272276 Query 29647 CAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTG-GACAAACTCTC 29705 ||| | || |||||||||||||| ||||| ||||| |||| | || | || | | | Sbjct 272277 CAGAGCCTCGACGTGGTCAAGGTAAACGTGCGCATCACCCATGACATGCGTCAGGCCC-C 272335 Query 29706 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29765 |||| | || || || || || ||||||| |||||| |||| |||||| ||||| | Sbjct 272336 CCGGCACCAGGTCGCACACATGGGCAATCATGTGCGTGAGCAGAGCGTAGCTAGCGATAT 272395 Query 29766 TAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814 | |||||||| || | ||||| || | ||||||||||| ||||| || Sbjct 272396 TGAAGGGCACTCCCAAGCCCATATCGCACGACCTCTGGTACAGCTGACA 272444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406154195742634