Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1199 114 1e-20 >seq1199 Length=300581 Score = 114 bits (126), Expect = 1e-20 Identities = 202/290 (70%), Gaps = 7/290 (2%) Strand=Plus/Plus Query 27024 ATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCAC 27083 ||| || ||||| |||| | | ||||||||| ||||| || | || | ||| |||| Sbjct 272157 ATGCGGCTCGTACCCCTTGATGACGAAATCCTCAGCCTTCCAGCCATCGATGCTG-CCAC 272215 Query 27084 CCT----CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCT 27139 ||| |||| ||| || ||| ||| | || || | ||| ||||| |||| Sbjct 272216 CCTTTTCCCTGGAAATCTCCAAGTCGGGGAAGACACGCGGTTCACGCTCCAGCTGCGTCT 272275 Query 27140 TCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCT 27198 ||| | || ||||| || ||||| ||||| || || |||| | || | || | | Sbjct 272276 CCAGAGCCTCGACGTGGTCAAGGTAAACGTGCGCATCACCCATGACATGCGTCAGGCCC- 272334 Query 27199 CCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATG 27258 ||||| | || || || || || ||||||| |||||| |||| |||||| ||||| Sbjct 272335 CCCGGCACCAGGTCGCACACATGGGCAATCATGTGCGTGAGCAGAGCGTAGCTAGCGATA 272394 Query 27259 TTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308 || ||||| || || | ||||| || | |||||||||||| |||||||| Sbjct 272395 TTGAAGGGCACTCCCAAGCCCATATCGCACGACCTCTGGTACAGCTGACA 272444 Score = 95.1 bits (104), Expect = 9e-15 Identities = 231/345 (67%), Gaps = 10/345 (3%) Strand=Plus/Plus Query 27383 TGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGT 27439 ||||||||||||| ||| ||||||||| | ||| ||| | ||| ||| || || Sbjct 272576 TGGGGTTCCAGGCCGACATGATGATGCGTCGGTCGAAGGGGGTATTCTTGAGCTTGTGGA 272635 Query 27440 CCACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTG 27498 ||| || || ||||| || || ||| ||| |||||| | ||| | Sbjct 272636 TCACCTCG----GCGAGCTGGTCGACGCCCTGGCCCTGGTAGTCGGTGCGGGCGTCGACG 272691 Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 ||||| || ||||| || | ||| ||||| ||||| || || |||||||| ||| | || Sbjct 272692 TACTCGGCGCCGAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCG 272751 Query 27559 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 27618 | |||| | ||| |||||| | || || | || ||||| ||||||||||||| Sbjct 272752 CGGTGCGAAAGGCCGACCTTGTCGAGGAACTCGCGCGAGCCGTTCCCGTCCCAGATCTTG 272811 Query 27619 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTC 27677 || ||| |||| ||| ||| ||| ||||| || |||||| || ||||| Sbjct 272812 ACGCCCGCCTCGCTCAGCGGCAGGGACGACGTGCTGCCCTC-GATGAACCAGAGGAGCTC 272870 Query 27678 CTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 | | |||||| ||||| | ||| ||||| |||||||| Sbjct 272871 GGCGATGACGGCGCGGGTGAAGACGCGCTTCGTCGTCAGGAGGGG 272915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369499008371789