Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1774 187 5e-42 seq1475 178 3e-39 seq805 170 4e-37 seq1461 100 6e-16 >seq1774 Length=381457 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| ||||| || || || | ||| || || || ||||||||||||| Sbjct 142342 ACCACCGCGCAGACGAAGGACAAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGA 142283 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || ||||| ||||||| || || ||||| || Sbjct 142282 CAGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 142223 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || ||| | || ||||| ||||| | ||||| Sbjct 142222 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATAGTATCCGACGACTCGAC 142163 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 142162 CTCGAGCGTGATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 142115 Score = 176 bits (194), Expect = 9e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || ||||| || | ||||| || || |||||||||||||||| Sbjct 142569 CCGCCACGGAGACGGAGGACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAC 142510 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || || || || |||||||| | ||| || |||||| || Sbjct 142509 AGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGAGGG 142450 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| | || ||| | || |||||||| || ||| || Sbjct 142449 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATAGTGTCGCTAGATTCCACC 142390 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| |||||||| ||||||| ||||| ||||| |||||||| Sbjct 142389 TCGAGAGTAATCGTCTTTCCCGTCAGGGTCTTGACGAAAATCTGCAT 142343 Score = 156 bits (172), Expect = 9e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| |||||||| ||||| || | ||||| || || |||||||||||||| | Sbjct 141886 ACCACCACGGAGGCGAAGAACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 141827 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| || || || || |||||||| | ||| || |||||| || Sbjct 141826 GAGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGAGG 141767 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || || | ||||| ||||| || | || || Sbjct 141766 AATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGAGGACTCAAC 141707 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| || || Sbjct 141706 CTCGAGGGTGATGGTCTTGCCGGT 141683 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | || || || |||||||||||||| | Sbjct 142114 ACCACCACGGAGGCGGAGGACGAGGTGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGA 142055 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || ||||| |||| || || ||||| || Sbjct 142054 GAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCCGGGGG 141995 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || ||| | ||||| |||||||| | || || Sbjct 141994 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGACGACTCAAC 141935 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | ||||| || || |||||||| Sbjct 141934 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 141887 >seq1475 Length=277423 Score = 178 bits (196), Expect = 3e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || ||||| || | ||| || || |||||||||||||| Sbjct 220655 ACCACCACGGAGGCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCT 220596 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || |||||||||| || || ||||| || Sbjct 220595 CAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGG 220536 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || ||| | ||||| ||||| |||| || || Sbjct 220535 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 220476 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| ||||| ||||| ||||| | ||||| ||||| |||||||| || Sbjct 220475 CTCGAGGGTGATAGTCTTCCCCGTAAGGGTCTTGACGAAGATCTGCATCTT 220425 >seq805 Length=824856 Score = 170 bits (188), Expect = 4e-37 Identities = 169/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || ||||| || | ||| || || |||||||||||||| | Sbjct 371901 ACCACCACGGAGGCGGAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 371842 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||||||||||| ||| || ||||| || Sbjct 371841 CAGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGG 371782 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | || || |||||||| | ||||| Sbjct 371781 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCCGAGGACTCGAC 371722 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||||| ||||| ||||| ||||||| ||||| ||||| Sbjct 371721 CTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 371683 >seq1461 Length=46181 Score = 100 bits (110), Expect = 6e-16 Identities = 171/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 230163 ATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGT 230222 ||| |||| || | || | | ||| ||||||||| | ||||||| | || ||| Sbjct 33294 ATCATCACCGATGCCGTCTCCATTGAGAAGGAGTTCCTCACCGACGCTCTGCCCTGCGCC 33353 Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || |||||||||| || |||||| ||| || || || || || || || ||| | Sbjct 33354 CTGCTCGGCATGAACGCCACCCTCATGCAGCAGTACATTGAGTTTGTCGCCGACCGTCTC 33413 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 | || || || || |||| || || || ||||| | |||||||||| || |||||| Sbjct 33414 CTGGTTGCCCTCGGCAACGACAAGGTCTACAACTCGACCAACCCCTTCGACTTCATGGAG 33473 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGG 230402 ||| || || || || || ||||||||||| |||||||| | || || || | | Sbjct 33474 AACATCTCCCTGGGTGGAAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAG 33533 Query 230403 CCCGGTGT 230410 | ||||| Sbjct 33534 GCTGGTGT 33541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046714804761626