Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq805 145 2e-29 seq1475 141 2e-28 seq1774 134 3e-26 >seq805 Length=824856 Score = 145 bits (160), Expect = 2e-29 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 |||||||| || || || || || || |||||||||||||| || ||| |||||||| Sbjct 371683 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATT 371742 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| |||||||| || || ||||| ||||||||||| || || Sbjct 371743 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTG 371802 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 ||||| |||||||| ||||| || || || | || || |||| || ||| |||| || Sbjct 371803 ATCTTTGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAG 371862 Query 178110 GAATCAACACTGCATCTTGT 178129 || || || ||||| || || Sbjct 371863 GAGTCCACCCTGCACCTGGT 371882 >seq1475 Length=277423 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || ||||||||||||||||| || ||| Sbjct 220431 CAGATCTTCGTCAAGACCCTTACGGGGAAGACTATCACCCTCGAGGTGGAGTCTTCCGAC 220490 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || ||||| ||||||||||| Sbjct 220491 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 220550 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||||| || ||||| | ||||| ||| || ||| || Sbjct 220551 CGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTGAGCGACTACAACATC 220610 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 220611 CAGAAGGAGTCCACTCTCCACCTGGT 220636 >seq1774 Length=381457 Score = 134 bits (148), Expect = 3e-26 Identities = 145/191 (76%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || |||||||| || || || || ||||| ||||| || |||||||||||| ||| Sbjct 142346 CAGATTTTCGTCAAGACCCTGACGGGAAAGACGATTACTCTCGAGGTGGAATCTAGC--- 142402 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| || || |||||||| |||||||||||||| || || |||||||| |||||| Sbjct 142403 GACACTATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAG 142462 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || |||||||| || || || |||||||| || || | || || | || || ||| Sbjct 142463 CAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTGTCTGACTACAAC 142522 Query 178101 GTCCAAAAAGA 178111 |||| || || Sbjct 142523 ATCCAGAAGGA 142533 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || || |||||||| ||||| || || ||| Sbjct 141890 CAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCGTCGGAC 141949 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || || || ||||||||||| Sbjct 141950 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 142009 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || || ||||| || ||||| | ||||| |||| || ||| || Sbjct 142010 CGCCTGATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTCTCCGACTACAACATC 142069 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| || || || Sbjct 142070 CAGAAGGAGTCGACACTCCACCTCGT 142095 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || || || || ||||| |||||||| || || || Sbjct 142118 CAGATCTTCGTCAAGACGTTGACCGGCAAGACCATCACGCTCGAGGTCGAGTCGTCGGAT 142177 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| ||||| |||||||| || || || || ||||||||||| Sbjct 142178 ACTATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 142237 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| |||||||| ||||| | || || | || || ||| | Sbjct 142238 CGCCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACGCTGTCTGACTACAACATT 142297 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| ||||| Sbjct 142298 CAGAAGGAGTCGACGCTGCACCTTGT 142323 Score = 120 bits (132), Expect = 7e-22 Identities = 128/169 (76%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || |||||||||||||| || ||| ||||||||||| || || || Sbjct 141681 TCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACCATCGACAATGTGAAGT 141740 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| |||||||| || || || ||||| |||||||| || || ||||| || || | Sbjct 141741 CGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTCATCTTTGCTGGCA 141800 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 | |||||||| || || | ||||| |||| || ||| |||| || || Sbjct 141801 AGCAGCTCGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAAGGA 141849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203703145915886