Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq43 122 1e-22 seq51 113 5e-20 >seq43 Length=2457951 Score = 122 bits (134), Expect = 1e-22 Identities = 444/686 (65%), Gaps = 18/686 (3%) Strand=Plus/Plus Query 53996 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 54055 || ||||| | || ||| || |||| | || || || ||||| ||||| || |||||| Sbjct 1097254 GGGCACATGAGCGTCCAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGGTCGGGAATC 1097313 Query 54056 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 54115 || || || | ||||| || | || | ||||| || || ||||| || Sbjct 1097314 CAGAGGGCCAGGAATAGGTCGCGGGCACGGACCTCCTCCTTGCCATGGTTCTTGCGGAGG 1097373 Query 54116 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGC 54175 || |||||| | | | || | ||||| || || | ||||||| | | | || || Sbjct 1097374 TCAAGGAACTCGAAGACGTCGGCGTGCCAAGGCTCGAGGTATATGCAGAAAGCACCGGGA 1097433 Query 54176 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 54235 || ||||| || ||||| || | ||| | || ||||| || || || | | ||| || Sbjct 1097434 CGCTTGTTACCACCCTGGTCGACGTAGCGGGCCGTGTTGTTGTAGACACGTAGCATAGGG 1097493 Query 54236 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--AT 54293 | ||||||||||| | || ||||| |||| || ||| || |||| || || Sbjct 1097494 ACGATACCATTGGAGGTGCCGTTGGTGCCGGCAATGTAGGAGCCCGTGGCGCGGATGCGG 1097553 Query 54294 TACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAAC 54352 | ||| || || || || || ||| | || ||||| | || || ||| || | Sbjct 1097554 TGGACGTTG--AGGCCGATGCCACCGGCCGTCTTGGAGATCATGGCACA-CGTCTTGAGG 1097610 Query 54353 GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATT 54412 ||||| || ||||| || || || || ||| |||| | | || || || |||| Sbjct 1097611 GTATCGTATATGCCGTCAATGCTGTCCTCCTTCATATCGACGAGGAAGCACGAGGACAGC 1097670 Query 54413 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 54472 ||| || || || || || || | ||| ||||| ||||| || || || || | Sbjct 1097671 TGGGCCTGAGGGGTACCGGCGTTGAAAAGGGTGGGAGATGCGTGGGTGAAGCACTTGTTG 1097730 Query 54473 GAAAGTAGATTGTACGTCTCGAT----AGCT-GA-GTCTATATCCCATTGATGAATTCCT 54526 || | || ||||| |||||||| ||| || || | |||| |||| || Sbjct 1097731 GACATGAGGTTGTATGTCTCGATGACACGCTCGATGTTGTCACCCCA--GATG----CCG 1097784 Query 54527 ACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGC 54586 || || |||||||| | ||||||||| || | || || |||||| || | || ||| Sbjct 1097785 ACGGCAACACGCATGATCATGTGCTGGGGACGCTCGACAATCTTGCCATTGAGCTTGAGC 1097844 Query 54587 AAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAA 54646 | |||||| || | || || || || || || | ||| ||||| || ||||| Sbjct 1097845 AGGTAGGAGCGCTCAAGGGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCGTAG 1097904 Query 54647 ATAATAACTGAGTTGAGTTTATCCTT 54672 | ||| | |||| ||| | ||||| Sbjct 1097905 ACAATGGCCGAGTCGAGCTCGTCCTT 1097930 >seq51 Length=1305468 Score = 113 bits (124), Expect = 5e-20 Identities = 364/563 (65%), Gaps = 18/563 (3%) Strand=Plus/Plus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || || || ||| ||| ||||||||||| | || | ||||| || || || || Sbjct 1212763 CAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGA 1212822 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 || ||||| || |||||||| || ||||| || ||||| ||||| | || ||||| Sbjct 1212823 CCTGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCCCCGCTGAAGAAG 1212882 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGT 24311 || || || || || |||||||| | ||| | | || | | | || ||| || Sbjct 1212883 ATGCCCTCGACAGCAGCAAAGGCGACAAGACGCTGGGCAAAGGTAGAGTTGCGGTCCTGG 1212942 Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 24371 |||||| | |||||| ||||||||||| | ||||| || ||||| || || || Sbjct 1212943 ATCCACCTGATAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTG 1213002 Query 24372 AAGAGATAGtttttttCATTACTA----TCTTTAACATATGTATCAATCAAAAGACTATA 24427 ||||| || | | | | | || || | || ||||| || | ||| || Sbjct 1213003 AAGAGGTA----TGTGCGCTGGGAGGGTTCCTTGATGTAGGTATCGATGAGGAGAGAGTA 1213058 Query 24428 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGT 24487 ||||||| |||||||| || || || || || |||||||| || | ||||||| Sbjct 1213059 GGTTTCCGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGG 1213118 Query 24488 AATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 24547 ||||| || || || || || || | | || || || || || || ||| ||| Sbjct 1213119 GATCTGGACCTCGCCACTGAAACGCTCAACGAGGTTCTCGTTGACAATGCCATCAGAGGC 1213178 Query 24548 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-----TGGTGTTAGTTTA 24602 || || || || | | || || || | || ||||| || || | || Sbjct 1213179 AGCGAAGAAGGCAAGGATGTGAGAGATGAAGAACTTCTCGTCATCATTGATG--CGGTTG 1213236 Query 24603 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 24662 ||||| || | || || || || | || | || || | ||||| || || ||||| Sbjct 1213237 TTCCAGTCGTGGAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCG 1213296 Query 24663 GCCTTTTTATACATATTCCAGAT 24685 ||||| || ||||| | |||||| Sbjct 1213297 GCCTTCTTGTACATCTGCCAGAT 1213319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721058229040