Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq54 183 4e-41 >seq54 Length=438711 Score = 183 bits (202), Expect = 4e-41 Identities = 281/399 (70%), Gaps = 4/399 (1%) Strand=Plus/Plus Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 |||||||||||| | | |||||||||||| |||||||| | ||| |||| Sbjct 361963 ACGTAGAACTGGGCAAACATGTGGCAGGGCGGAAGGGCCATCTTCTTGATGTCGCTCGGG 362022 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGG 145989 |||||||| | | || || | || | ||| | |||||| || |||| Sbjct 362023 TTCCAGGCTGACATGATGATGCGCCGGTCAAAAGGGCTGTTCTTGAGCTTGTGGATCACC 362082 Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049 || |||||||| |||||||| ||| |||| || || || ||| |||||| |||| Sbjct 362083 TCGGCCAGCTGGTCGACGCCCTGGCCCTGGTAGTCGGTGCGGGCGTCGACGTACTCGGCG 362142 Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCC 146109 |||||||| | ||||||||| || |||||||| |||||||| ||| ||| | ||| ||| Sbjct 362143 CCGAAGTGGCGCCACTGGAAGCCATAGACGGGACCCAGGTCGCCGACCTCGCGGTGGCCC 362202 Query 146110 AGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CC 146167 | ||| | | | ||||||| || || || |||||| ||||||||||||||||||| || Sbjct 362203 AAGCCGACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCCGCC 362262 Query 146168 TCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGA 146227 |||| || | | | || |||| ||| ||| |||||||| ||||| ||| || Sbjct 362263 TCGCTCAGCGGT--ATAGACGACGTGCTGCCCTCGATAAACCAGAGGAGCTCGGCGATGA 362320 Query 146228 CCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 | | | |||||| | ||||| ||||| || |||| Sbjct 362321 TGGCGCGCGTGAAGACACGTTTGGTCGTCAGAAGTGGGA 362359 Score = 150 bits (166), Expect = 2e-31 Identities = 142/181 (78%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 |||||| || ||||| ||| ||||||| ||||||||||| || || |||| |||||| Sbjct 361689 CAGCTGCGTCTCCAGGGCCTCGACGTGGTCAAGGTAGACGTGTGCATCTCCCATGACGTG 361748 Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 | | | |||||| |||| | || |||||||| ||||| ||| ||||||| ||| Sbjct 361749 CGTCAGGCTCCCGGGTACGAGATCGCAGACGTGGGCGATCATGTGGGTTAGCAGGGCGTA 361808 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 |||||| ||||||||||| || ||||| ||||| || | ||| | ||||||||||||||| Sbjct 361809 GCTGGCGATGTTGAAGGGGACGCCCAGACCCATATCGCACGACCTCTGGTACAGCTGGCA 361868 Query 145851 G 145851 | Sbjct 361869 G 361869 Score = 86.0 bits (94), Expect = 7e-12 Identities = 96/128 (75%), Gaps = 3/128 (2%) Strand=Plus/Minus Query 36755 CGGACGCGGAGGGCTACCAGGGGGCCACGGTCATAGACCCCTCGCCCGGGTTCTACAACA 36814 |||||| | || ||| |||| ||||||||||| || || ||| ||||| ||| ||| Sbjct 247006 CGGACGAGCAG---TACGAGGGAGCCACGGTCATCGAGCCGACGCGCGGGTATTACGACA 246950 Query 36815 CCCCGGTGCTGGTGGTGGACTTTGCCAGCCTGTACCCCACCATCATCCAGGCCCACAACC 36874 |||||| | | |||| || || ||||||||||| |||||| ||||| ||||| | Sbjct 246949 TGCCGGTGGCGACGCTGGATTTCGCATCCCTGTACCCCAGCATCATGCAGGCGCACAATC 246890 Query 36875 TCTGCTAC 36882 | |||||| Sbjct 246889 TGTGCTAC 246882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076261554920