Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq51 356 2e-93 seq43 147 2e-30 seq46 140 3e-28 >seq51 Length=1305468 Score = 356 bits (394), Expect = 2e-93 Identities = 570/810 (70%), Gaps = 19/810 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| ||||||| | |||||| Sbjct 1213319 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATTGACCTG 1213260 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||||||| | ||| | || || ||||| |||||| Sbjct 1213259 TCCAAGGACCTCCACGACTGGAACAACCGCATCAATGATGACGAGAAGTTCTTCATCTCT 1213200 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | || ||||| ||||| ||| || ||||| ||||||||||| || || |||||| Sbjct 1213199 CACATCCTTGCCTTCTTCGCTGCCTCTGATGGCATTGTCAACGAGAACCTCGTTGAGCGT 1213140 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | ||||| ||| | ||||||| || ||||||||||| || |||||| ||| Sbjct 1213139 TTCAGTGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATCATGATG 1213080 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTTC 116928 |||||| | |||||||||| || || ||||||||| || ||| | | | || | Sbjct 1213079 GAGAACATTCACTCGGAAACCTACTCTCTCCTCATCGATACCTACATCAAGGAACCCTCC 1213020 Query 116929 G-GAGGAGA-AGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAG 116986 | | | | | ||| || |||||||| ||||| || || ||| || ||||| Sbjct 1213019 CAGCGCACATACCTC------TTCAACGCCATTGAGACCATCCCTTGCATCCGCAAGAAG 1212966 Query 116987 GCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTG 117046 ||||| ||||| | | |||||| | | | | | |||| | | |||| || || Sbjct 1212965 GCCGACTGGGCTATCAGGTGGATCCAGGACCGCAACTCTACCTTTGCCCAGCGTCTTGTC 1212906 Query 117047 GCCTTCGCGGCCGTCGAGGGCGTCTTCTTTT-CGGGCAGTTTCGCCGCCATATTTTGGCT 117105 ||||| || || ||||||||| ||||||| |||| ||| || |||| || ||||| Sbjct 1212905 GCCTTTGCTGCTGTCGAGGGCATCTTCTTCAGCGGGGCCTTT-GCTTCCATCTTCTGGCT 1212847 Query 117106 CAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGA 117165 |||||| || || || ||||| || ||||| ||| |||||||||||||| | ||||| Sbjct 1212846 CAAGAAGCGTGGTCTGATGCCAGGTCTGACCTTCTCTAACGAGCTCATCTCGCGTGACGA 1212787 Query 117166 GGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGC 117225 |||||| || |||||||||||| ||||| | ||| | ||| || | ||| Sbjct 1212786 GGGTCTCCACACCGACTTTGCCTGCCTGCTGCACTCGCACCTCAAGCACCGCGCCAGCAA 1212727 Query 117226 GGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGA 117285 | | | || || ||| ||||||| || |||||||| ||| || |||||||| || Sbjct 1212726 GCAGATCATCCACGAAATCATCACCGATGCCGTCGCCATTGAGAAGGAGTTCCTCACAGA 1212667 Query 117286 AGCGCTG-CCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGT 117344 ||| ||| || |||| ||||| || | ||| | |||| ||| ||||| |||| Sbjct 1212666 AGCTCTGCCCTGTGC-CCTGCTCGGCATGAATGCCTCCCTGATGCAGCAGTACATTGAGT 1212608 Query 117345 TCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACC 117404 | ||||| ||| | || ||| ||| || | | || |||| ||||||| || |||||| Sbjct 1212607 TTGTCGCAGACCGTCTACTGGTCGCCCTCGGCAACGACAAGGTCTACAACTCGACCAACC 1212548 Query 117405 CGCTGGACTTTATGAACCTCATCTCCTTGG 117434 | | ||||| ||| | ||||||| ||| Sbjct 1212547 CCTTCGACTTCATGGAGAACATCTCCCTGG 1212518 >seq43 Length=2457951 Score = 147 bits (162), Expect = 2e-30 Identities = 162/213 (76%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || |||||||| || || |||||| | || || || | Sbjct 2352730 AAGATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTGGAGTCT 2352789 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | | |||| ||||| || || | ||||| |||||||||||| |||| Sbjct 2352790 TCCGACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGA 2352848 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || || |||| || ||||| ||||| || || | |||||||| | |||||| Sbjct 2352849 CCAGCAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 2352908 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||||| |||| || || || || Sbjct 2352909 CAACATCCAGAAGGAGTCCACTCTCCACCTGGT 2352941 Score = 104 bits (114), Expect = 2e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||||||||| | |||||||| || || |||| || || || |||||||| Sbjct 65730 GACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAG 65789 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 |||| |||||||| |||||||||||||||||||||| ||| ||||| Sbjct 65790 GACGGTCGCACCCTGTCCGACTACAACATCCAGAAGGAGAGCACCCTGCA 65839 >seq46 Length=2353920 Score = 140 bits (154), Expect = 3e-28 Identities = 151/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| | || ||||| | | |||| | Sbjct 1617796 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCTTCGGACACTATT 1617737 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||||||||||||||| ||||||||||||| || Sbjct 1617736 GACAATGTCAAGTCCAAGATCCAGGACAAAGAGGGCATCCCTCCGGACCAGCAACGCCTG 1617677 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| || || ||||| || |||| |||||||| ||||||||||||||||||| Sbjct 1617676 ATCTTCGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAG 1617617 Query 40879 GAGGCCACGCTGCATCTAGT 40898 ||| | || ||||| || || Sbjct 1617616 GAGTCGACCCTGCACCTGGT 1617597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218729862480